DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and ABCG5

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_178984.1 Gene:ABCG5 / 815846 AraportID:AT2G13610 Length:649 Species:Arabidopsis thaliana


Alignment Length:682 Identity:151/682 - (22%)
Similarity:269/682 - (39%) Gaps:170/682 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRGNLTGDVVLNGMAMERHQMTRISSFLPQ 112
            :|:..:...|..:::||:|.|||||::||..::.||... ||.|.:|...::|....:||.::.|
plant    62 VLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQ-TGSVYVNKRPVDRANFKKISGYVTQ 125

  Fly   113 FEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTR-----IQQLSGGER 172
            .:......|..|.|.|.:  |:..:....|.|.||..|:..:||...|..|     ::.:|||||
plant   126 KDTLFPLLTVEETLLFSA--KLRLKLPADELRSRVKSLVHELGLEAVATARVGDDSVRGISGGER 188

  Fly   173 KRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSG 237
            :|:|:..|:|.||..|..||||:||||.||..:|..|:|:                         
plant   189 RRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHM------------------------- 228

  Fly   238 ESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFT 302
                             ||                        |..:..|.:||||...|.:.|.
plant   229 -----------------AE------------------------TRGRTIILTIHQPGFRIVKQFN 252

  Fly   303 HIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLK----------------------- 344
            .::|:..|..:.||..:|...:....|...||:.|..:|.::                       
plant   253 SVLLLANGSTLKQGSVDQLGVYLRSNGLHPPLHENIVEFAIESIESITKQQRLQESRRAAHVLTP 317

  Fly   345 --TLADKEGKENAGAVLRAKYE-----HETDGLYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVY 402
              ||.:|..:::.|.....|:.     .:|.....|:..:|..::.|       |...| :.:..
plant   318 QTTLQEKRSEDSQGESKSGKFTLQQLFQQTRVADVGTMNIATEFTRD-------FANSR-LEETM 374

  Fly   403 LLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGI--GGLTQRTVQDVGGSIFMLSNEMIFT 465
            :|..||.....|...         :....|:.::.|||  |.:......|:.|     :.|.:..
plant   375 ILTHRFSKNIFRTKE---------LFACRTVQMLGSGIVLGLIFHNLKDDLKG-----ARERVGL 425

  Fly   466 FSYGVTYIFPA---ALP-------IIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYA 520
            |::.:|::..:   |||       |:.:|...|:|.:|:|.||..|.::|.......:|.:.:|.
plant   426 FAFILTFLLTSTIEALPIFLQEREILMKETSSGSYRVSSYAVANGLVYLPFLLILAILFSTPVYW 490

  Fly   521 SIYYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDT 585
            .:.....|:.:|....|:.|....|....|..|:|..:..:.:...:.....|.:|.|.:::...
plant   491 LVGLNPSFMAFLHFSLLIWLILYTANSVVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISNHE 555

  Fly   586 VPG----LKYLSLFFY------------SNEALMYKFWIDIDNIDCPVNEDHPCIKTGVEVLQQG 634
            :||    :.|:|||.|            ||:.|.|.|              ..|:.|..::|::.
plant   556 IPGYWIFMHYISLFKYPFEGFLINEFSKSNKCLEYGF--------------GKCLVTEEDLLKEE 606

  Fly   635 SYRNADYTYWLDCFSLVVVAVIFHIVSFGLVR 666
            .|  .:.:.|.:...::...:::..:|:.::|
plant   607 RY--GEESRWRNVVIMLCFVLLYRFISYVILR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 73/272 (27%)
3a01204 40..673 CDD:273361 151/682 (22%)
ABC2_membrane 404..604 CDD:279410 50/227 (22%)
ABCG5NP_178984.1 3a01204 37..638 CDD:273361 151/682 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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