DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and abcg4a

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_687685.2 Gene:abcg4a / 564842 ZFINID:ZDB-GENE-050517-39 Length:641 Species:Danio rerio


Alignment Length:691 Identity:157/691 - (22%)
Similarity:289/691 - (41%) Gaps:152/691 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEWKQLNYYVPDQEQSNYSFWNECRKKRELR-ILQDASGHMKTGDLIAILGGSGAGKTTLLAAIS 80
            ||:.:|:|.:.:         ..|.::|..: :|:..||...:.:||.|:|.|||||:||:..::
Zfish    55 LEFTELSYTIRE---------GPCWRRRGFKALLKCLSGKFCSRELIGIMGPSGAGKSTLMNILA 110

  Fly    81 QRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQ 145
            ......:.|.:::||...:.....::|.::.|.::.:...|..|.:...::.|::.  ....|::
Zfish   111 GYRETGMKGQILVNGRPRDLRTFRKMSCYIMQDDMLLPHLTTREAMMVSANLKLNE--NMEVKKE 173

  Fly   146 RVADLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLR 210
            .|.::|.|:||::.|.||...||||:.|||::|.||:.:|..:|.||||:||||.|.:.|:..::
Zfish   174 LVNEILTALGLQECAQTRTISLSGGQCKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMK 238

  Fly   211 HLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLS 275
            .|                              ..|.::|                          
Zfish   239 SL------------------------------AQGGRTI-------------------------- 247

  Fly   276 NSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPAD 340
                       ||:||||::.:||:|..:.::..|:.:|:|.......:..:||...|...||||
Zfish   248 -----------ICTIHQPSAKLFEMFDKLYILSQGQCIYKGTVPYLIPYLKNLGLHCPTYHNPAD 301

  Fly   341 FYLKTLADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYSGD-----------------YL-K 387
            |.::..:.:.|..|  .||   :|....||.|..   ::..|.|                 |: |
Zfish   302 FIIEVASGEYGDLN--PVL---FEAVQGGLCSDD---SKKNSSDKNDPTTSCPSQCYPDSGYIEK 358

  Fly   388 HVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVG 452
            |......:.   |..:|..|......|::....:.....:...|.:.|:|..||....:...:.|
Zfish   359 HTFATSTLT---QFCILFKRTFITICRDVVLTHLRVMSHLCIGVLIGLLYLNIGNDASKVFNNTG 420

  Fly   453 GSIF-MLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLS 516
            ...| ||.  ::|.........||..:.:..||.....|||.|||:|..::.:|.     .|...
Zfish   421 FLFFSMLF--LMFAALMPTVLTFPLEMGVFIREHLNYWYSLKAYYLAKTMADIPF-----QVICP 478

  Fly   517 VIYASIYY--------TRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIF 573
            ::|.||.|        ...:||:::   |.:.:|:.|...|:.:.:...|.::|:.......:..
Zfish   479 IMYCSIVYWMTEQPPEAGRYLLFMA---LSTSTALVAQSLGLLIGAASTSLQVATFVGPVSAIPV 540

  Fly   574 LIFGGTYMNVDTVPGL----KYLSLFFYSNEALMYKFW-IDIDNIDCPVNEDHPCIKTGV----- 628
            |:|.|.::|.||:|..    .|:|...|..|.::...: ::...::||          |:     
Zfish   541 LLFSGFFVNFDTIPKYLQWSSYVSYVRYGFEGVILSIYGMNRSELECP----------GIVCKFQ 595

  Fly   629 ---EVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVR 666
               ||||.....:|  ..::|...|.|..::..:.::.::|
Zfish   596 KPEEVLQLLDVEDA--KLYVDFMVLGVFFLVLRLATYFVLR 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 69/285 (24%)
3a01204 40..673 CDD:273361 153/668 (23%)
ABC2_membrane 404..604 CDD:279410 49/212 (23%)
abcg4aXP_687685.2 3a01204 38..641 CDD:273361 157/691 (23%)
ABCG_EPDR 53..277 CDD:213180 73/299 (24%)
ABC2_membrane 372..574 CDD:279410 49/211 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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