DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and st

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster


Alignment Length:691 Identity:192/691 - (27%)
Similarity:321/691 - (46%) Gaps:137/691 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NYSFWNECRK-------------------KRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAA 78
            :||.|:...:                   :|..||:.:::|.::.|.|:|::|.||:|||||::.
  Fly    56 SYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMST 120

  Fly    79 ISQRLRGN--LTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKA 141
            ::.|....  :.||:::||..:... |.|||.::.|.::.:.:.|..|||.||:|.::.||.:|.
  Fly   121 LAFRQPAGTVVQGDILINGRRIGPF-MHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKE 184

  Fly   142 EKRQRVADLLLAVGLRDAAHTRI------QQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSF 200
            |:|..:.:||...||..||.|||      :.|||||||||:.|.||:.:|:.||||||||||||:
  Fly   185 ERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSY 249

  Fly   201 SAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTM 265
            ||..::.||..|..:                                                  
  Fly   250 SAQQLVATLYELAQK-------------------------------------------------- 264

  Fly   266 RELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGY 330
                          ||   ..:|:||||:|.:|:.|.:::|:..||:.:.|..:.|..||.:.||
  Fly   265 --------------GT---TILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGY 312

  Fly   331 ELPLNCNPADFYLKTLADKEGKENAG-----------AVLRAKYEHETDGLYSGSWLLARSYSGD 384
            ..|...|||||.:..||...|.|.|.           ||..|  ..:.|.|.:....:|:|.:..
  Fly   313 YCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCDQFAVSSA--AKQRDMLVNLEIHMAQSGNFP 375

  Fly   385 YLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQ 449
            :...|::|:.:.|..:.:::.:|.....||:.....:.|...:..|..:...::|....:|..||
  Fly   376 FDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQ 440

  Fly   450 DVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVF 514
            .|.|::|::.:|..:...|.|..:||...|:..||...|.||...||.|.:|:.:|....:..:|
  Fly   441 AVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIF 505

  Fly   515 LSVIY-----ASIYYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFL 574
            :.:.|     .|.:|..| :..:.:..:|::    |...|.|.|:.|.|..:|.....|.|.||:
  Fly   506 VIICYWLTGLRSTFYAFG-VTAMCVVLVMNV----ATACGCFFSTAFNSVPLAMAYLVPLDYIFM 565

  Fly   575 IFGGTYMNVDTVP----GLKYLSLFFYSNEALMYKFWIDIDNIDC-PVNEDHPCIKTGVEVLQQG 634
            |..|.::.|:::|    ..::||...|:|||:....|..:.||.| ..:.|.||..||.:||.:.
  Fly   566 ITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKY 630

  Fly   635 SYRNADYTYWLDCFSLVVVAVIFHIVSFGLVRRYIHRSGYY 675
            |:..::  .:.:..::|.:...||::            |||
  Fly   631 SFNESN--VYRNLLAMVGLYFGFHLL------------GYY 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 92/309 (30%)
3a01204 40..673 CDD:273361 186/680 (27%)
ABC2_membrane 404..604 CDD:279410 55/208 (26%)
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 89/299 (30%)
3a01204 67..665 CDD:273361 189/680 (28%)
ABC2_membrane 395..600 CDD:279410 55/209 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.920

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