DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bw and w

DIOPT Version :10

Sequence 1:NP_523824.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_476787.1 Gene:w / 31271 FlyBaseID:FBgn0003996 Length:687 Species:Drosophila melanogaster


Alignment Length:727 Identity:193/727 - (26%)
Similarity:314/727 - (43%) Gaps:163/727 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QESGGSSGQGGPSLCLEWKQLNYYVPDQEQSNYSFWNE---------CRKKR----ELRILQDAS 53
            ::||..|||...:|...|..::.:....:..  |.|.:         |.::.    ...:|::..
  Fly    55 EDSGSGSGQLAENLTYAWHNMDIFGAVNQPG--SGWRQLVNRTRGLFCNERHIPAPRKHLLKNVC 117

  Fly    54 GHMKTGDLIAILGGSGAGKTTLLAAIS----QRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFE 114
            |....|:|:|::|.|||||||||.|::    |.::.:.:|..:|||..::..:|....:::.|.:
  Fly   118 GVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDD 182

  Fly   115 INVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHT------RIQQLSGGERK 173
            :.:.:.||.|||.|.:..:|.|..|..::..||..::..:.|....||      |::.|||||||
  Fly   183 LFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERK 247

  Fly   174 RLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGE 238
            ||:.|.|.:|||..|.|||||:|||||:|:||::.|:.|                          
  Fly   248 RLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKL-------------------------- 286

  Fly   239 SSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTH 303
                                                  |..|   |..|.:||||:|::||||..
  Fly   287 --------------------------------------SQKG---KTVILTIHQPSSELFELFDK 310

  Fly   304 IILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLADKEGKE--------------- 353
            |:||..||:.:.|...:|..||:.:|.:.|.|.||||||::.||...|:|               
  Fly   311 ILLMAEGRVAFLGTPSEAVDFFSYVGAQCPTNYNPADFYVQVLAVVPGREIESRDRIAKICDNFA 375

  Fly   354 -----------NAGAVLRAKYEHETDG-LYSGSWLLARSYSGDYLKHVQNFKKIRW------IYQ 400
                       .|...|....|...:| .|..:|.:             .|:.:.|      :.:
  Fly   376 ISKVARDMEQLLATKNLEKPLEQPENGYTYKATWFM-------------QFRAVLWRSWLSVLKE 427

  Fly   401 VYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFT 465
            ..|:.||.:...:..|..|||..|                ..|||..|.::.|:||:....|.|.
  Fly   428 PLLVKVRLIQTTMVAILIGLIFLG----------------QQLTQVGVMNINGAIFLFLTNMTFQ 476

  Fly   466 FSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASIYYTRGFLL 530
            ..:....:|.:.||:..||.....|....|::...::.:|:......||.::.|..|....|.|.
  Fly   477 NVFATINVFTSELPVFMREARSRLYRCDTYFLGKTIAELPLFLTVPLVFTAIAYPMIGLRAGVLH 541

  Fly   531 YLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVP----GLKY 591
            :.:...|::|.|..:..:|..:|....|..||.....|..:.||:|||.::|..:||    .|.|
  Fly   542 FFNCLALVTLVANVSTSFGYLISCASSSTSMALSVGPPVIIPFLLFGGFFLNSGSVPVYLKWLSY 606

  Fly   592 LSLFFYSNEALMYKFWIDID--NIDCPVNEDHPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVA 654
            ||.|.|:||.|:...|.|::  .|.| .:.:..|..:|..:|:..::..||..  ||...|.::.
  Fly   607 LSWFRYANEGLLINQWADVEPGEISC-TSSNTTCPSSGKVILETLNFSAADLP--LDYVGLAILI 668

  Fly   655 VIFHIVSFGLVR 666
            |.|.::::..:|
  Fly   669 VSFRVLAYLALR 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_523824.1 3a01204 40..673 CDD:273361 184/680 (27%)
wNP_476787.1 3a01204 68..687 CDD:273361 188/714 (26%)

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