DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg3l3

DIOPT Version :10

Sequence 1:NP_523824.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:700 Identity:152/700 - (21%)
Similarity:261/700 - (37%) Gaps:214/700 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRG-NLTGDVVLNGMAMERHQMTRISSFLPQ 112
            |...||.|..| |.||:|.....::.||..::.|... .|:||:::||.....: ....|.::||
  Rat    64 LSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILVNGKPQPAN-FKCTSGYVPQ 126

  Fly   113 FEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHT--RIQQLSGGERKRL 175
            .::.:.|.|..::|.|.:..::....|:.|||:|:.::|..:.|....:|  |.::|    |||.
  Rat   127 NDVIMHTVTVRDNLEFSAALRLPMTITRNEKRRRINEVLELLHLEKEQNTKPRSKEL----RKRT 187

  Fly   176 SLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESS 240
            |:|.||:|:...||.|:||||||..:...:|..||.:..:.|                       
  Rat   188 SIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLRRMSKKGR----------------------- 229

  Fly   241 ASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHII 305
                                                        ..|.||:||...||..|..:.
  Rat   230 --------------------------------------------TVIFSINQPQYSIFRFFDSLT 250

  Fly   306 LMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETD-- 368
            |:..|::::.|..:.|.::||..||:...:.|||||:|..:       |.|.....:..||.|  
  Rat   251 LVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFFLDVI-------NGGLCDTEEDGHEADEH 308

  Fly   369 ---------------GLYSGS--------------------------------------WLLARS 380
                           .:|:.|                                      |:..||
  Rat   309 EDLYERLHQVTEKLANMYAQSPLHSDTRAKLDQLLGEQKQDRRSAMETTFVTPFWHQFGWITLRS 373

  Fly   381 YSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQ 445
            :        :|||...|:..:.                        .|.||.|::....|..|.|
  Rat   374 F--------KNFKGFPWVTVIQ------------------------AIIAVILAVFVGTIFRLLQ 406

  Fly   446 RTVQDV---GGSIFMLSN-EMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVA-LVLSFVP 505
            ....:|   .|.:|.|:. |.|.:.|.|..::...  .....|...|.|.:|:|:.. |:...:|
  Rat   407 NVCTEVKARAGLLFFLTGFECILSVSAGELFLLDR--NHFLHEHTSGYYRVSSYFFGKLLAELIP 469

  Fly   506 VAFFKGYVFLSVIY--ASIYY-TRGFLLYLSMGFLMSLSAVA---AVGYGVFLSSLFESDKMASE 564
            .......:|..:.|  |.:.. .:||.:.:....:::.||.:   ::|.|            .:.
  Rat   470 RRLLPSMIFTLITYFIAGMKTGVKGFFVTIFTVMMLASSASSLSLSLGAG------------ENT 522

  Fly   565 CAAPFDLI-----FLIF--GGTYMNVDTVPGL---KYLSLFFYSNEALMYKFWIDIDNIDCP--- 616
            .|.|..||     |::|  |.:..:::.:|.|   :|||:..|...||::..::. .|. ||   
  Rat   523 AALPTTLITIYFMFMLFFSGLSLFSINFLPQLSWIQYLSIPHYGFRALLHNEFLG-QNF-CPEHN 585

  Fly   617 VNEDHPC----IKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSF 662
            ..|...|    |.||.|.||.....::.:.:|.:..:|..:.:|..::|:
  Rat   586 TEEVSRCQNYVICTGEEFLQNLDIDSSSWGFWENHLALTCIMIILLMISY 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_523824.1 3a01204 40..673 CDD:273361 152/699 (22%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 152/699 (22%)

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