DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg3l3

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001100675.1 Gene:Abcg3l3 / 305142 RGDID:1564709 Length:647 Species:Rattus norvegicus


Alignment Length:700 Identity:152/700 - (21%)
Similarity:261/700 - (37%) Gaps:214/700 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRG-NLTGDVVLNGMAMERHQMTRISSFLPQ 112
            |...||.|..| |.||:|.....::.||..::.|... .|:||:::||.....: ....|.::||
  Rat    64 LSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILVNGKPQPAN-FKCTSGYVPQ 126

  Fly   113 FEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHT--RIQQLSGGERKRL 175
            .::.:.|.|..::|.|.:..::....|:.|||:|:.::|..:.|....:|  |.::|    |||.
  Rat   127 NDVIMHTVTVRDNLEFSAALRLPMTITRNEKRRRINEVLELLHLEKEQNTKPRSKEL----RKRT 187

  Fly   176 SLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFETPSGESS 240
            |:|.||:|:...||.|:||||||..:...:|..||.:..:.|                       
  Rat   188 SIAVELVTEHPILFLDDPTTGLDLRTTTDIIAVLRRMSKKGR----------------------- 229

  Fly   241 ASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFELFTHII 305
                                                        ..|.||:||...||..|..:.
  Rat   230 --------------------------------------------TVIFSINQPQYSIFRFFDSLT 250

  Fly   306 LMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLADKEGKENAGAVLRAKYEHETD-- 368
            |:..|::::.|..:.|.::||..||:...:.|||||:|..:       |.|.....:..||.|  
  Rat   251 LVASGKLMFHGPAQDALEYFTSAGYQYESHNNPADFFLDVI-------NGGLCDTEEDGHEADEH 308

  Fly   369 ---------------GLYSGS--------------------------------------WLLARS 380
                           .:|:.|                                      |:..||
  Rat   309 EDLYERLHQVTEKLANMYAQSPLHSDTRAKLDQLLGEQKQDRRSAMETTFVTPFWHQFGWITLRS 373

  Fly   381 YSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQ 445
            :        :|||...|:..:.                        .|.||.|::....|..|.|
  Rat   374 F--------KNFKGFPWVTVIQ------------------------AIIAVILAVFVGTIFRLLQ 406

  Fly   446 RTVQDV---GGSIFMLSN-EMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVA-LVLSFVP 505
            ....:|   .|.:|.|:. |.|.:.|.|..::...  .....|...|.|.:|:|:.. |:...:|
  Rat   407 NVCTEVKARAGLLFFLTGFECILSVSAGELFLLDR--NHFLHEHTSGYYRVSSYFFGKLLAELIP 469

  Fly   506 VAFFKGYVFLSVIY--ASIYY-TRGFLLYLSMGFLMSLSAVA---AVGYGVFLSSLFESDKMASE 564
            .......:|..:.|  |.:.. .:||.:.:....:::.||.:   ::|.|            .:.
  Rat   470 RRLLPSMIFTLITYFIAGMKTGVKGFFVTIFTVMMLASSASSLSLSLGAG------------ENT 522

  Fly   565 CAAPFDLI-----FLIF--GGTYMNVDTVPGL---KYLSLFFYSNEALMYKFWIDIDNIDCP--- 616
            .|.|..||     |::|  |.:..:::.:|.|   :|||:..|...||::..::. .|. ||   
  Rat   523 AALPTTLITIYFMFMLFFSGLSLFSINFLPQLSWIQYLSIPHYGFRALLHNEFLG-QNF-CPEHN 585

  Fly   617 VNEDHPC----IKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSF 662
            ..|...|    |.||.|.||.....::.:.:|.:..:|..:.:|..::|:
  Rat   586 TEEVSRCQNYVICTGEEFLQNLDIDSSSWGFWENHLALTCIMIILLMISY 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 65/269 (24%)
3a01204 40..673 CDD:273361 152/699 (22%)
ABC2_membrane 404..604 CDD:279410 46/220 (21%)
Abcg3l3NP_001100675.1 3a01204 64..644 CDD:273361 152/699 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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