DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg3l1

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_001004076.2 Gene:Abcg3l1 / 289453 RGDID:1303294 Length:646 Species:Rattus norvegicus


Alignment Length:734 Identity:157/734 - (21%)
Similarity:269/734 - (36%) Gaps:248/734 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRG-NLTGDVVLNGMAMERHQMT 104
            ::.|.:..|...||.|..| |.||:|.....::.||..::.|... .|:||:::||.....: ..
  Rat    56 QQTRVMERLSSISGIMGPG-LNAIMGPQDGSRSLLLDVLAARRDPCGLSGDILINGKPRPAN-FK 118

  Fly   105 RISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRIQQLSG 169
            ..|.::||.::.:.|.|..::|.|.:..::....|:.|||:|:.::|..:.|.  ....::..|.
  Rat   119 CTSGYIPQNDVVLGTVTVRDNLEFSAALRLPMTVTRDEKRRRINEVLELLHLE--KEQNVKPRSK 181

  Fly   170 GERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGEDSFET 234
            |.|||.|:|.||:|:...||.|:||||||..:...||..||.:                      
  Rat   182 GLRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVISILRRM---------------------- 224

  Fly   235 PSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPTSDIFE 299
                 |..|                                        |..|.||:||...||.
  Rat   225 -----SMKG----------------------------------------KTIIFSINQPQYSIFR 244

  Fly   300 LFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTL------ADKEG---KENA 355
            .|..:.|:..|::::.|....|.::||..||:...:.|||||:|..:      .:::|   .||.
  Rat   245 FFDSLTLVASGKLMFHGPARDALEYFTSAGYQYESHNNPADFFLDVINGGFPDTEEDGHEADENE 309

  Fly   356 GAVLRAKYEHETDG----LYSGS--------------------------------------WLLA 378
            ..|.|   :|:..|    :|:.|                                      |:..
  Rat   310 EFVER---QHQVTGKLANMYAQSPLHSATRARLDQLLGEQKLDRSSAVETTCVTPFWHQLGWITR 371

  Fly   379 RSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMT-------EDLRNI------RSGLIAF--GFFMI 428
            ||:        :||....|:..:.::::..:.       ..|:|:      |:.||..  ||..|
  Rat   372 RSF--------KNFLGFPWVTTIQVIIIVILAVVVGTAFRLLQNVCTELQMRAILILLLTGFQCI 428

  Fly   429 TAVTLSLMYSGIGGLTQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLS 493
            |:||                   .|.:|::..:...                  .|...|.|.:|
  Rat   429 TSVT-------------------AGELFVIDQDRFL------------------HEHTSGYYRVS 456

  Fly   494 AYYVA-LVLSFVPVAFFKGYVFLSVIY------ASI--YYTRGF----LLYLSMGFLMSLSA--- 542
            :|:.. |:...:|.......:|..:.|      .|:  ::|..|    |.|.:....:||.|   
  Rat   457 SYFFGKLLAELIPRRLLPSTIFTLITYFIAGLRTSVRGFFTMTFTIMMLAYSASSLSLSLGAGEN 521

  Fly   543 VAAVG------YGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVPGL---KYLSLFFYS 598
            |||:.      |.||:                     |.|.|..::...:|.|   :|.|:..|.
  Rat   522 VAAITTLLVTIYFVFM---------------------LFFSGLSLDTGFLPVLSWIRYFSIPHYG 565

  Fly   599 NEALMYKFWIDIDNIDCP---VNEDHPC----IKTGVEVLQQGSYRNADYTYW-----LDCFSLV 651
            ..||::..::. .|. ||   ..|...|    |.||.|.|:...:..:.:.:|     |.|..::
  Rat   566 FRALLHNEFLG-QNF-CPEYNTEEVSRCQNYVICTGEEFLEIQGFHLSSWGFWENHLALACTMII 628

  Fly   652 VVAVIFHIVSFGLVRRYIH 670
            ::.:.:  |...|:::..|
  Rat   629 LLTITY--VQLLLLKKRKH 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 68/275 (25%)
3a01204 40..673 CDD:273361 157/734 (21%)
ABC2_membrane 404..604 CDD:279410 46/239 (19%)
Abcg3l1NP_001004076.2 P-loop_NTPase 35..261 CDD:304359 68/275 (25%)
3a01204 64..644 CDD:273361 155/723 (21%)
ABC2_membrane 369..572 CDD:279410 51/268 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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