DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg3

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:XP_017176394.1 Gene:Abcg3 / 27405 MGIID:1351624 Length:683 Species:Mus musculus


Alignment Length:728 Identity:150/728 - (20%)
Similarity:262/728 - (35%) Gaps:234/728 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ESGGSSGQGGPSLCLEWKQ----------------LNYYVPDQEQSN------------YSFWN- 38
            :|..:|....|.:..:||:                :..::.|..::|            .||.| 
Mouse    51 KSSCASSNLSPCIISQWKKEPPEMASNNDPTVISMIERHLCDLPETNTSDLKTLTEEAVLSFHNI 115

  Fly    39 ----------ECRKKR-ELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRL--RGNLTGD 90
                      ..|||. .:..|.:.||.||.| |.||:|.....::.||..::.|.  || |:||
Mouse   116 SYQETVQSGFPLRKKAYVIERLSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRDPRG-LSGD 178

  Fly    91 VVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVG 155
            :::||.....: ....|.::||.::.:.|.|..::|.|.:..::....|:.|||:|:.::|..:.
Mouse   179 ILINGKPRPAN-FKCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRINEVLELLH 242

  Fly   156 LRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAK 220
            |.  ....|:..|...|||.|:|.||:|:...||.|:||||||..:...||..||.:..:.|   
Mouse   243 LN--KEQNIKPRSKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKKGR--- 302

  Fly   221 HSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKA 285
                                                                            .
Mouse   303 ----------------------------------------------------------------T 303

  Fly   286 AICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTL---- 346
            .|.||:||...||:.|..:.|:..|::::.|..:.|.::|...||....:.|||||:|..:    
Mouse   304 IIFSINQPQYSIFKFFDSLTLVASGKVMFHGPAQDALEYFRSAGYNYESHNNPADFFLDVINGGF 368

  Fly   347 -----ADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYSG-----------DYLKHVQNFKK- 394
                 .:::|.|:      .|||...:..|..:..||..|:.           |.|...|..:: 
Mouse   369 SNILDTEEDGHED------DKYEELFERQYQVTGKLANMYAQSPLYSETRAILDQLLGEQKLERS 427

  Fly   395 --------------IRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSGIGGLTQ 445
                          ::||          :.:..:|.:      ||..:|.:...        :|.
Mouse   428 SAVETTCVTPFCHQLKWI----------ICQSFKNFK------GFPWVTVIQAI--------ITV 468

  Fly   446 RTVQDVGGSIFMLSNEMI-----------FTFSYGVTYIFPAALPIIRR-----EVGEGTYSLSA 494
            .....||.:..:|.|:.|           .|....:|.:....|.:|.|     |...|.|.:|:
Mouse   469 ILATAVGTAFRVLKNDCIEVQMRAGLLYLLTIFQCITSVSAGELFVIDRVRFLHEHTSGYYRVSS 533

  Fly   495 YYVA-LVLSFVPVAFFKGYVFLSVIYA------------SIYYTRGFLLYLSMGFLMSLSA-VAA 545
            |:.. |:...:|.......||..:.|.            ::..|...|.|.:....:|:.| ..|
Mouse   534 YFFGKLLAELIPRRLLPSTVFSLITYVIAGVKMSMKCFFTMICTIMVLAYSASSLPLSIGAGENA 598

  Fly   546 VGYGVFLSSLFESDKMASECAAPFDLIFLIF-------GGTYMNVDTVPGLKYLSLFFYSNEALM 603
            |.....|.:::              .:|::|       .|:::  ..:..::|.|:..|...||:
Mouse   599 VAVPTLLVTIY--------------FVFMLFFSGLSLYSGSFL--PKLSWIQYFSIPHYGFRALL 647

  Fly   604 YKFWIDIDNIDCP 616
            :..::. .|. ||
Mouse   648 HNEFLG-QNF-CP 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 75/310 (24%)
3a01204 40..673 CDD:273361 140/652 (21%)
ABC2_membrane 404..604 CDD:279410 41/236 (17%)
Abcg3XP_017176394.1 3a01204 137..670 CDD:273361 137/642 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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