DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg4

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:698 Identity:158/698 - (22%)
Similarity:286/698 - (40%) Gaps:164/698 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEWKQLNYYVPDQEQSNYSFWNECRKKRELR-ILQDASGHMKTGDLIAILGGSGAGKTTLLAAIS 80
            :|:.:|:|.|.:         ..|.:||..: :|:..||.....:||.|:|.|||||:|.:..::
Mouse    61 IEFVELSYSVRE---------GPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILA 116

  Fly    81 QRLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQ 145
            ......:.|.:::||...|.....::|.::.|.::.:...|..|.:...::.|:..:  :..|::
Mouse   117 GYRESGMKGQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEK--QEVKKE 179

  Fly   146 RVADLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLR 210
            .|.::|.|:||...:|||...||||:||||::|.||:.:|..:|.||||:||||.|.:.|:..::
Mouse   180 LVTEILTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMK 244

  Fly   211 HLCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLS 275
            .|                            |.|.                               
Mouse   245 SL----------------------------AHGG------------------------------- 250

  Fly   276 NSPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPAD 340
                    :..||:||||::.:||:|..:.::..|:.:::|.......:...||...|...||||
Mouse   251 --------RTVICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPAD 307

  Fly   341 FYLK----------------------TLADKE---GKENAGAVLRAKYEH------ETDGLYSGS 374
            |.::                      |:|:|:   ||....|       |      |.|.:.|.:
Mouse   308 FIIEVASGEYGDLNPMLFRAVQNGLCTMAEKKSSPGKNELPA-------HCPTCPPELDPIESHT 365

  Fly   375 WLLARSYSGDYLKHVQNFKKIRWIYQVYLLMVRFMTEDLRNIRSGLIAFGFFMITAVTLSLMYSG 439
            :..:.                  :.|..:|..|.....||:.....:.|...::..|.:.|:|..
Mouse   366 FATST------------------LTQFCILFRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYLH 412

  Fly   440 IGGLTQRTVQDVGGSIF-MLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSF 503
            ||....:...:.|...| ||.  ::|.........||..:.:..||.....|:|.|||:|..::.
Mouse   413 IGDDASKVFNNTGFLFFSMLF--LMFAALMPTVLTFPLEMAVFMREHLNYWYTLKAYYLAKTMAD 475

  Fly   504 VPVAFFKGYVFLSVIYASIYY--------TRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDK 560
            ||.     .|...|:|.||.|        |..|||:.::..   .:|:.|...|:.:.:...|.:
Mouse   476 VPF-----QVVCPVVYCSIVYWMTGQPAETSRFLLFSALAI---ATALVAQSLGLLIGAASTSLQ 532

  Fly   561 MASECAAPFDLIFLIFGGTYMNVDTVPGL----KYLSLFFYSNEALMYKFW-IDIDNIDCPVNED 620
            :|:.......:..|:|.|.:::..|:|..    .|||...|..|.|:...: ::..::.| ::|.
Mouse   533 VATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSSYLSYVRYGFEGLILTIYGMERGHLTC-LDEQ 596

  Fly   621 HPCIKTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVRRY 668
            .| .:....:|::.....|  ..::|...|.:..:...:::: ||.||
Mouse   597 CP-FRDPQIILRELDVEEA--KLYMDFLVLGIFFLALRLLAY-LVLRY 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 70/285 (25%)
3a01204 40..673 CDD:273361 154/675 (23%)
ABC2_membrane 404..604 CDD:279410 53/212 (25%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 158/698 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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