DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and wht-3

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_497825.2 Gene:wht-3 / 175528 WormBaseID:WBGene00007631 Length:614 Species:Caenorhabditis elegans


Alignment Length:664 Identity:162/664 - (24%)
Similarity:282/664 - (42%) Gaps:159/664 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQR-LRG-NLTGDVVLNGMAMERHQMTR 105
            |::.::|...||..|.|:::|::|.||||||||:..:..| ::| ...|.|.:||..:.: :::.
 Worm    55 KKQKQLLNRVSGIAKPGEMVALMGASGAGKTTLMNVLMCRNMKGLEKNGTVKVNGTKIGK-EISL 118

  Fly   106 ISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQRVADLLLAVGLRDAAHTRI------ 164
            ||.|..|.||.:.|.|..|:|...:..:|  :..|..:|:||.:::..:.|::....:|      
 Worm   119 ISGFAQQQEIFIPTLTVDEYLMIQARLRM--KANKHTRRERVDEIIEMLRLQNCRDLKIGTPGLV 181

  Fly   165 QQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQVYGE 229
            :.:||||.:||:.|.||:::|..||.||||:|||||.|.||::.|::|                 
 Worm   182 KGISGGEARRLTFACELLSNPSLLFADEPTSGLDSFMAASVVQILKNL----------------- 229

  Fly   230 DSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSNSPNGTHKKAAICSIHQPT 294
                                     |.|..:|                            |||||
 Worm   230 -------------------------ANSGRTL----------------------------IHQPT 241

  Fly   295 SDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADFYLKTLA-----DKEGKEN 354
            :::|..|..||.:..|:..:.|...::.|||.|.|:.:|...||.::....|:     :.:.:|.
 Worm   242 AELFFQFDKIIFLSMGKTAFMGTPHESVKFFADCGHPIPKLFNPPEWIQSKLSVIPNNETKSRET 306

  Fly   355 AGAVLRAKYEHETDGLYSGSWLLARSYSGDYLKHVQNFKKIRWIYQVYL---------------L 404
            .|.::.         .|..|           :.|.::..:||.|....|               |
 Worm   307 IGKIIE---------FYEKS-----------IIHQKSIVEIRVIATTELPPYIENPGFFAETGAL 351

  Fly   405 MVRFMTEDLRN---IRSGLI---AFGFFMITAVTLSLMYSGIGG------LTQRTVQDVGGSIFM 457
            :.|...:.:|:   :|..||   ..|.|             ||.      |..|.|::...:::.
 Worm   352 LKRACLDVIRSPAQMRMKLIQKVVMGLF-------------IGSLYWQQPLDPRGVRNTNSALYF 403

  Fly   458 LSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAFFKGYVFLSVIYASI 522
            |..|:.|:..:|:.......||:|.||..:|.:.:.:||::..||::|:....|.:.:.:.|..|
 Worm   404 LIAELTFSTMFGIMTFMEHELPLIAREYHDGLFYVISYYISRFLSYLPLFTIDGALMIVISYWMI 468

  Fly   523 YYTRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASECAAPFDLIFLIFGGTYMNVDTVP 587
            .....:........:..|...:|...|:||:.|||:..:|...|.|...:|.:..|.|.|.:..|
 Worm   469 GLNSTWQQVAKSILISVLVEQSATSCGLFLACLFETTSLAIAFAVPASGLFALLSGLYGNTNNFP 533

  Fly   588 ----GLKYLSLFFYSNEALMYKFWIDIDNIDCPVNEDHPCIKTGVEVLQQGSYRNADYTYWLDCF 648
                .:::.|...|..|.|:...|..:||     .:..|..:.  .:|:|.|: |.| .|.||..
 Worm   534 VYIRWMQWTSWCRYGFEGLVVNQWSQVDN-----PKWDPFYRE--LILKQFSF-NKD-NYQLDVI 589

  Fly   649 SLVVVAVIFHIVSF 662
            .|..:.:.|::..:
 Worm   590 GLCSIVIFFYLAGY 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 78/280 (28%)
3a01204 40..673 CDD:273361 162/664 (24%)
ABC2_membrane 404..604 CDD:279410 51/215 (24%)
wht-3NP_497825.2 ABCG_EPDR 36..263 CDD:213180 78/280 (28%)
3a01204 37..614 CDD:273361 162/664 (24%)
ABC2_membrane 351..555 CDD:279410 51/216 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.780

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