DRSC/TRiP Functional Genomics Resources

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Protein Alignment bw and Abcg1

DIOPT Version :9

Sequence 1:NP_001286769.1 Gene:bw / 37724 FlyBaseID:FBgn0000241 Length:675 Species:Drosophila melanogaster
Sequence 2:NP_033723.1 Gene:Abcg1 / 11307 MGIID:107704 Length:666 Species:Mus musculus


Alignment Length:697 Identity:172/697 - (24%)
Similarity:302/697 - (43%) Gaps:156/697 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEWKQLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQ 81
            :|:|.|:|.||:.     .:|   :||....:|:..||...:|:|:||:|.|||||:||:..::.
Mouse    77 IEFKDLSYSVPEG-----PWW---KKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAG 133

  Fly    82 RLRGNLTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKRQR 146
            .....:.|.|::|||..:.....::|.::.|.::.:...|..|.:...:|.|:..:  ...:|:.
Mouse   134 YRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEK--DEGRREM 196

  Fly   147 VADLLLAVGLRDAAHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRH 211
            |.::|.|:||...|:||...||||:||||::|.||:.:|..:|.||||:||||.|.:.|:..::.
Mouse   197 VKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKG 261

  Fly   212 LCTRRRIAKHSLNQVYGEDSFETPSGESSASGSGSKSIEMEVVAESHESLLQTMRELPALGVLSN 276
            |                              ..|.:||                           
Mouse   262 L------------------------------AQGGRSI--------------------------- 269

  Fly   277 SPNGTHKKAAICSIHQPTSDIFELFTHIILMDGGRIVYQGRTEQAAKFFTDLGYELPLNCNPADF 341
                      :|:||||::.:||||..:.::..|:.||:|:......:..|||...|...|||||
Mouse   270 ----------VCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADF 324

  Fly   342 YLKTLADKEGKENAGAVLRAKYEHETDGLYSGSWLLARSYSGD-----YLKH------------V 389
            .::..:.:.|.:|: .::||..|...|..|.      |...||     :|.|            .
Mouse   325 VMEVASGEYGDQNS-RLVRAVREGMCDADYK------RDLGGDTDVNPFLWHRPAEEDSASMEGC 382

  Fly   390 QNFKKIRWIYQVYLLMVRFMTEDLR-----------NIRSGLIAFGFFMITAVTLSLMYSGIGGL 443
            .:| ....:.|..:|..|.....:|           :|..||:           :.|:|.|||..
Mouse   383 HSF-SASCLTQFCILFKRTFLSIMRDSVLTHLRITSHIGIGLL-----------IGLLYLGIGNE 435

  Fly   444 TQRTVQDVGGSIFMLSNEMIFTFSYGVTYIFPAALPIIRREVGEGTYSLSAYYVALVLSFVPVAF 508
            .::.:.: .|.:|.....::|.........||..:.:..||.....|||.|||:|..::.||.  
Mouse   436 AKKVLSN-SGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREHLNYWYSLKAYYLAKTMADVPF-- 497

  Fly   509 FKGYVFLSVIYASIYY--------TRGFLLYLSMGFLMSLSAVAAVGYGVFLSSLFESDKMASEC 565
               .:...|.|.||.|        ...|:|:.::|.:.||   .|...|:.:.:...|.::|:..
Mouse   498 ---QIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSL---VAQSLGLLIGAASTSLQVATFV 556

  Fly   566 AAPFDLIFLIFGGTYMNVDTVPG----LKYLSLFFYSNEALMYKFW-IDIDNIDCPVNEDHPC-I 624
            .....:..|:|.|.:::.||:|.    :.|:|...|..|.::...: :|.:::.|.:.|  .| .
Mouse   557 GPVTAIPVLLFSGFFVSFDTIPAYLQWMSYISYVRYGFEGVILSIYGLDREDLHCDIAE--TCHF 619

  Fly   625 KTGVEVLQQGSYRNADYTYWLDCFSLVVVAVIFHIVSFGLVRRYIHR 671
            :....:|::....||  ..:||   .:|:.:.|  :|..|:..::.|
Mouse   620 QKSEAILRELDVENA--KLYLD---FIVLGIFF--ISLRLIAYFVLR 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bwNP_001286769.1 P-loop_NTPase 31..316 CDD:304359 77/284 (27%)
3a01204 40..673 CDD:273361 165/674 (24%)
ABC2_membrane 404..604 CDD:279410 51/222 (23%)
Abcg1NP_033723.1 3a01204 60..666 CDD:273361 172/697 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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