DRSC/TRiP Functional Genomics Resources

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Protein Alignment seq and SNT2

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_011384.1 Gene:SNT2 / 852746 SGDID:S000003099 Length:1403 Species:Saccharomyces cerevisiae


Alignment Length:632 Identity:98/632 - (15%)
Similarity:197/632 - (31%) Gaps:204/632 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VNMLPAANTLNGIPQQQQQQQYASTDGNV------------YQLQNEIL---------------- 82
            :..:|...||..|....|...|::.:|.:            :|..|::|                
Yeast   724 IKWVPPLETLRKITGTCQNSFYSAIEGIIEENNTNKFTLSPFQAHNKLLEWELVQDSELIIRQRM 788

  Fly    83 ---------CDANGHAVTAATASYQTTASSPQQQQ-QQQQQQQNVATSVADNVVTTISSSSILHT 137
                     .....:::|..|..|:....|.::.: ..:..|:::...:.||             
Yeast   789 KVYKNPNSFVKMKRYSMTFHTQLYKMAVRSYRKNEFHPETMQRDLELFIEDN------------- 840

  Fly   138 NANTNGVDTLAATQQQQQQQQQQQQQQ-------QQQHYHYITTTGEDGQTPTTIVFENYNGGMP 195
                  .:...|..:|:.::.:..:.:       |.......:.|..:.:.....:.:..|..:|
Yeast   841 ------KEVRKAIPEQKPERAKNTKDEFPVNIIRQSPGTIKTSDTSRNRKCNDVFIEKASNNNIP 899

  Fly   196 AVSSAAPTPVPVSQANAPATTTTTALVNTDGTIIEFDGSTYEEYHVLKSEPGSSDCLSNGSSAVA 260
            .:::|:...:.:| .....:::.:..|:.....::||..|::.             |.|....|.
Yeast   900 KITNASNDLIEIS-IKTGGSSSGSVSVDKGFKFVKFDNKTFQR-------------LRNSLKLVN 950

  Fly   261 ADIIKYDPQHGVVGDEEDDDENGMLHVKYEEQSLEHDPENEHDAEQEHEYEEYQVIKAEVEAEAA 325
            ..:.||             :|.....:|........:|.||.:....:    |.||....|.   
Yeast   951 NKLPKY-------------NEPSTKKIKMINDIALSNPLNEPNGASYN----YTVISHSKET--- 995

  Fly   326 ELAAGTTSYTISQEQTGSGNTVLSSMVPKSGSAAAAKQKRKRKTRVIADDEQGEYLEKMSVRGLD 390
                     :::.|:...||.. |.|:.|.......|.|.|......|::....:......:..|
Yeast   996 ---------SVALEKYHDGNKP-SKMLEKDMILKHTKNKPKNPDTAWANNSARTFCSVCKEKFND 1050

  Fly   391 IARYEHIID--GVAYCLVC---------AKNDIFKTFKNKYSFQRHAYLFHEGQN------RKIF 438
            ...||.:..  |:.....|         .||...||||         :|.....|      ...:
Yeast  1051 NDNYEVVCGNCGLTVHYFCYAIKLPKDMKKNTNLKTFK---------WLCDPCSNDLNPIISTTY 1106

  Fly   439 ACPIC---NKEFSR---------PDKMK-------------MHKKD-KHGD-VPMPPSATTTPLK 476
            .|.:|   :.::.|         ||.:|             :..:| |:|: ..|.|:..||.:.
Yeast  1107 QCSMCPTKDYDYDRYRSQSFKICPDALKCTSLGTWVHLVCSLFNEDIKYGNGQSMQPALNTTAVL 1171

  Fly   477 ADGPPAKRAR-TARTPRV--------------------RKTKDGSTPTKKRLAQIDSVL---DDV 517
                 .|.:| |....|:                    :.:.:.....:|:...:|:.|   .||
Yeast  1172 -----IKHSRFTCGVCRINGGGLVKCNKCQYRYHITCAQNSSNFKLMFEKKNMSVDTTLPCIKDV 1231

  Fly   518 QNGESLTMAPVSVSHSQQQQQQQIQHSIT----TLAPSTPSQPQHQL 560
            :..::.|:.|:.:..         :|.|:    .|.|.: .:|||.|
Yeast  1232 KLNDTYTLRPILICD---------RHDISLEGNELYPLS-YKPQHTL 1268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370 8/34 (24%)
SNT2NP_011384.1 BAH_fungalPHD 112..256 CDD:240061
PHD1_Snt2p_like 319..366 CDD:276972
Myb_DNA-binding 559..602 CDD:395191
PHD2_Snt2p_like 1040..1094 CDD:276973 12/62 (19%)
ePHD_Snt2p_like 1108..1248 CDD:277137 24/153 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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