DRSC/TRiP Functional Genomics Resources

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Protein Alignment seq and jade2

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:XP_697831.5 Gene:jade2 / 569359 ZFINID:ZDB-GENE-120215-66 Length:795 Species:Danio rerio


Alignment Length:745 Identity:134/745 - (17%)
Similarity:233/745 - (31%) Gaps:247/745 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 QQQQQQQQQQQQQQHYHY---------ITTTGEDGQTPTTIVF-ENYN----------------- 191
            ||..|||.:.|:.....|         .:..||||   ..:|| :|.|                 
Zfish   174 QQNMQQQIENQEGLGIEYDEDVVCDVCRSPEGEDG---NEMVFCDNCNVCVHQACYGILKVPQGN 235

  Fly   192 --------------------GG-------------------MPAVSSAAPTPV-PVSQ-ANAPAT 215
                                ||                   :|.||...|..: |::: ::.||:
Zfish   236 WLCRTCALGVQSKCLLCPRRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKVSHIPAS 300

  Fly   216 ---TTTTALVNTDGTIIEFD-GSTYEEYHV---------LKSEPGSSD-------CL-------S 253
               .:.:......||.|:.. .|....:||         :::....:|       ||       |
Zfish   301 RWALSCSLCCEHSGTCIQCSMPSCTVAFHVTCAFDHGLEMRTTLADNDEVRFKSYCLEHSSVWRS 365

  Fly   254 NGSSAVAADIIKYDPQHGVVGDEEDDDENGMLHVKYEEQSLEHDPENEHDAEQEHEYEEYQVIKA 318
            |.|..|.:|  :.||:|.|.....         .:.:||:............||.|.|.|.::..
Zfish   366 NSSGGVQSD--RPDPRHAVPDPAA---------AQKQEQAEREKASQRKQKLQELEDEFYTLVDP 419

  Fly   319 EVEAEAAELAAGTTSYTISQ---EQTGSGNTVLSSMVPKSGSAAAAKQKRKRKTRVIADDEQGEY 380
            :..||:..|......:....   .:..:||..|.||             ::.:...:|..||...
Zfish   420 KDIAESLSLPDAHVDFLFQYWKLRRKTNGNKPLVSM-------------KRDEVDNLAQQEQDVL 471

  Fly   381 LEKMSV---RGLDIARYEHIIDGVAYCLVCAKNDIFKTFKNKYSFQRHAYLFHEGQNRKIFACPI 442
            ..::.:   ...|:.|..::.     |::..:..|      |:|.                 |.:
Zfish   472 YRRLKLFTHLRQDLERVRNLC-----CMITRREKI------KHSL-----------------CNL 508

  Fly   443 CNKEFSRP----DKMKMHKKDKHGDVPMPPSATTTPLKADGPPAKRARTARTPRVRKTKDGSTPT 503
            ..|.||..    ::..:.:|.:.|:                   ::.|.....||::.:..|...
Zfish   509 QEKIFSLQIQLMEQNLVGEKSQRGE-------------------RKHRNRVQERVKERRKNSPEK 554

  Fly   504 KKRLAQIDSVLDDVQNGESLTMAPVSVSHSQQQQQQQIQHSIT------TLAPSTPSQPQHQLQT 562
            |.:....|:.|.. |.|.|.:. |:..|.....|.|.|..|..      :|:..||       :|
Zfish   555 KDKWRSDDNSLFS-QLGFSRSF-PIDGSLFDSWQAQSIHISAESMLSRWSLSAGTP-------ET 610

  Fly   563 LPSLDFSGMILPGGAQL-------ALANPGATSSVGLQRGPATPNGQPAPPTTTLIYSNQLELQQ 620
            ..|| .|..:|.|...|       ::.|...|..:|.:...:.|..:                ::
Zfish   611 SASL-LSDQLLRGEESLLSLMMDSSMQNTWKTPRLGRKHPKSAPRSR----------------RK 658

  Fly   621 ALLQQQLQGQSIMIQDQAGNLVPLQLDGTQAIYTTAPQAQRQQTTATYQTTQQQQQQPAQQPAGQ 685
            .|.....:|:                     :..|..:.:|.:.|..:|.:...:..|. |||..
Zfish   659 TLCSPPAKGK---------------------VCVTERRCRRGEKTEDFQRSSDGRSDPL-QPAIA 701

  Fly   686 AQQQPHY--ELDNVTYLSSTAAATPTSAEQQQQQQQQQHVIGTVQSYQILTPDGLQNFQPKLETA 748
            .....|.  |.|:|....|..:.......|.:.:.:.|.|..:|||.   |||...:.....|..
Zfish   702 KMDSCHISEERDSVLEKRSQKSVRMHLPRQSKTRCKSQTVESSVQSN---TPDTETDGYFSDEEQ 763

  Fly   749 ELGDLCPYSQYTF--TTHAGAQPTLNANAL 776
            ..|:|..:|:.:.  ..|||.:..:..:.|
Zfish   764 SDGELRLFSRKSRMPQMHAGKEEVVRRSLL 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370 4/25 (16%)
jade2XP_697831.5 COG5141 107..>515 CDD:227470 69/395 (17%)
PHD_JADE2 196..241 CDD:277150 8/47 (17%)
ePHD_JADE2 249..359 CDD:277175 18/109 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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