DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment seq and CG34376

DIOPT Version :10

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:448 Identity:88/448 - (19%)
Similarity:124/448 - (27%) Gaps:182/448 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 LDDVQNGESLTMAPV-SVSHSQQ-------QQQQQIQH---------------SITTLA-PSTPS 554
            ||:..|.|...:.|: .::..:|       :::....|               |:|:.| ||.|.
  Fly   241 LDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSSASPSAPI 305

  Fly   555 QPQHQLQTLPSLDF------SGMILPGGAQLALANPGATS---SVGLQRGPATPNGQPAPPTTTL 610
            :.......:.|.::      ||   |.|:......||..:   ||||..|...||....|...:.
  Fly   306 RNPFAPNFMDSFNYYKGGNSSG---PSGSSNNSVGPGGVNNNGSVGLGSGAEYPNELYMPNDYSK 367

  Fly   611 IYSNQLELQQALLQQQLQGQSIMIQDQAGNLVPLQ----LDGTQAIYTTAPQAQRQQTTATY--- 668
            .::|.::                |.....|:|.|.    |.| ..::........||...||   
  Fly   368 SFANHMD----------------IPSSGSNMVMLSTTSLLHG-NCVFNRNNTVATQQGMKTYWLC 415

  Fly   669 --------------------QTTQQQQQQPAQQPAGQAQQQPHYELDNVTYLSSTAAATPTSAEQ 713
                                ..|......|..: .||....|     :...:|...|.||.|:  
  Fly   416 KSYRISMCRARCITHLGRIISATGVHNHTPHMR-GGQGSSAP-----STASVSGNPAPTPISS-- 472

  Fly   714 QQQQQQQQHVIGTVQSYQILTPDGLQNFQPKLETAELGDLCPYSQYTFTTHAGAQPTLNANALD- 777
                          |:...||..|             |.|.|..|     |......:.||... 
  Fly   473 --------------QAGYSLTDGG-------------GHLGPDLQ-----HGNRVTNMFANQTPP 505

  Fly   778 ----------AQTQHQQHH--------------------QQQQH-------------------HH 793
                      |.|.|..||                    ..:||                   ||
  Fly   506 PPPPPPPLPVASTPHHPHHHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQTPTHH 570

  Fly   794 QQQQHHQQTQLLQQQPFATHHNPHQQFMELKNELLIKGGDAYTLDTASMYHLPFSPTS 851
            .|||||||            |:||......::.|.:.||........|..||..||.|
  Fly   571 HQQQHHQQ------------HSPHNPPPPQQHNLELGGGSGSGAVLLSPAHLQQSPQS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370
CG34376NP_732741.1 BTB_POZ_BAB-like 29..112 CDD:349624
FLYWCH 387..443 CDD:461332 7/56 (13%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.