DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment seq and CG15439

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_608836.1 Gene:CG15439 / 33651 FlyBaseID:FBgn0031606 Length:1008 Species:Drosophila melanogaster


Alignment Length:983 Identity:158/983 - (16%)
Similarity:288/983 - (29%) Gaps:406/983 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 VSQANAPATTTTTALVNTDGTIIEFD-GSTYEEYHVLKSEPGSSDCLSNGSSAVAADIIKYDPQH 270
            :.:|..|..||.        .:::|| |.:..:...|   |...:| |:||.             
  Fly     1 MKRARQPKITTQ--------ALLDFDLGESSSDSDFL---PDIDNC-SDGSK------------- 40

  Fly   271 GVVGDEEDDDENGMLHVKYEEQSLEHDPENEHDAEQEHEYEEYQVIKAEVEAEAAELAAGTTSYT 335
                ||.|.|.:.      .:.|...|.|::.|||.|....:.:.:.||.|....|.......:.
  Fly    41 ----DESDGDGSS------SDASGGSDSESDSDAESEDSTLQLRQLLAETEPSPLENGINGVDHC 95

  Fly   336 ISQEQTGSGNTVLSSMVPKSG---SAAAAKQ-------KRKRKTRVIADDE-------QGEY--L 381
                   :.::..:.:||::.   |:|.||:       :|......|.:.:       :|.|  .
  Fly    96 -------AASSPAAPVVPRAPLQLSSAPAKRMCCVCLGERSDDVNEIVECDSCGVSVHEGCYGVS 153

  Fly   382 EKMSV------------------------------------RGLDIARYEHII-----DGVAY-- 403
            :.:|:                                    :..|:.::.|:|     .|||:  
  Fly   154 DNVSISSTNSTCSTEPWFCEACRAGVSEPDCELCPNKGGIYKETDVGKWVHLICALYVPGVAFGE 218

  Fly   404 ---------------------CLVCAKNDIF--------------KTFKNKYSFQRHAYLFHEGQ 433
                                 |.:| :|.:|              ||:.:....|...:|. |..
  Fly   219 VEQLSSVTLFEMQYSKWGAKVCSLC-ENALFARTGVCIGCDAGMCKTYFHVTCAQVAGFLI-EAH 281

  Fly   434 NRKIFACPI---CNKEFSRPDKMKMHKKDKH-------------------GDVPMP---PSATTT 473
            :....|.|.   | |..|..:.:|..:::.|                   .:.|.|   |:....
  Fly   282 HEDDAADPFYAHC-KVHSEKEMIKKRRRNYHTLRLNMMQRAREKEALAAEHETPAPHPNPAQARI 345

  Fly   474 P---LKADGPPAKRARTARTPRV------RKTKDGSTPTKKRLAQIDSVLDDVQNGE-------S 522
            .   ||......:......||.|      |.....::..::.||:.:.:..|||:.|       :
  Fly   346 QRKLLKIQHKYTRHKELKPTPWVPTQKMSRLLTTSASACRRLLAKAEIMSVDVQHLEQREAHINA 410

  Fly   523 LT-------MAP--------------VSVSHSQQQQQQQIQHSI--------------------- 545
            ||       :||              |.:...:|||::.|.|:.                     
  Fly   411 LTDIRKKWHIAPAFSVEFTAYYMDRIVRMDDFRQQQRELISHNAILSKDQDVLRAQYDTALEERK 475

  Fly   546 -----------------TTLAPSTPSQPQHQLQTLPSLDFSGMILPGG---------AQLALANP 584
                             |.|....|:      .||||:|.....||..         .|..::.|
  Fly   476 AVKATKDSLLTSIKSLHTALGQIAPN------MTLPSVDLIAHPLPEAPPKTSTPTPPQRPISVP 534

  Fly   585 GATSSVGLQRGPATPNGQPAPPTTTLIYSNQL---------ELQQALLQ----------QQLQGQ 630
            .|.:   |:.|...|.|...||.:.:..|..|         ....|.::          ::.:.|
  Fly   535 TAAA---LKMGVGFPLGHLGPPGSKMDSSRMLSTHAKQGKHSTSSASVEAAPSVSCGICKRSKDQ 596

  Fly   631 SIMIQDQAGNL--------VPLQLDGTQAIYTTAPQAQRQ--------------QTTATYQTTQQ 673
            .::::....||        .||         |..|:..:|              ....|..::..
  Fly   597 HLLVKCDTCNLHYHLGCLNPPL---------TRPPKKSKQYGWQCSECCDKSEGSDAVTEISSGP 652

  Fly   674 QQQQPAQQPAGQAQQQPHYELDNVTYLSSTAAATPTSAEQQQQQQQQQHVIGTVQSYQILTPDGL 738
            ::.:......|.......|.||::          |.:|....::...:..:.  :|.....|:.:
  Fly   653 RKSRTRFNKDGHLVYVDRYSLDDI----------PVAAVNVPKESHTKRALN--KSLPAPAPEYI 705

  Fly   739 QNF-----QPKLETAELGDLC------PYSQYTFTTHA----------GAQPTL----------- 771
            ::.     :|||::.     |      |....|.||.|          .|.|||           
  Fly   706 EDLTKSPKRPKLQSP-----CKTPINVPAENVTPTTDAAPVAASAATPAAAPTLPTPNTIVINLS 765

  Fly   772 ------------------------NANALDAQT------QHQQHHQQQQHHHQQQQHHQQTQLLQ 806
                                    |.:.|.:.|      :|::..:::.|..:...|...     
  Fly   766 GCEDSIDDSSGKLSRKGKRKDKHKNKHNLSSDTEKSIGKEHKRKRKKRAHLDESSTHLDN----- 825

  Fly   807 QQPFATHHNPHQQFMELKNELLIKGGDAYTLDTASMYHLPFSPTSMINAVNDVNTSSLLETKEIS 871
                 ..:........:...|.:.|.||    ..|.|.  :.|.:.:.:|::.:..:.:||.|.|
  Fly   826 -----AGNTSGSTIKIIFKALRLPGEDA----PESQYF--YVPANAVRSVDEASRPTSVETVEDS 879

  Fly   872 YDISEAVL 879
            ...:|..|
  Fly   880 VQGAEQAL 887

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370 8/39 (21%)
CG15439NP_608836.1 PHD1_PHF14 120..175 CDD:277036 5/54 (9%)
ePHD_PHF14 184..297 CDD:277144 19/115 (17%)
PHD2_PHF14 586..635 CDD:277037 8/57 (14%)
PHD3_PHF14 949..997 CDD:277038
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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