DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment seq and jade1

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_956099.1 Gene:jade1 / 327437 ZFINID:ZDB-GENE-030131-5648 Length:829 Species:Danio rerio


Alignment Length:496 Identity:96/496 - (19%)
Similarity:172/496 - (34%) Gaps:159/496 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 ADIIKYD---PQH-GVVGDEEDDDENGMLHVKYEEQ---------------SLEHDPENEHDAE- 305
            ||.:|:.   |:| |:..:||:.|::..:.|...|.               .|..:||....:| 
Zfish   349 ADEVKFKSFCPKHSGLDWNEEEGDDDRPVKVPTREDRSRNRGIDFSASSQTRLSQNPEETRLSER 413

  Fly   306 ----QEHEYEEYQVIKAEVEAEAAELAAGTT----SYTISQEQTGSGNTVLSSMVPKSGSAAAAK 362
                |:.|.|.|:.:.|:..||..:|.....    .|...:.:......::.....:..|.|..:
Zfish   414 KLRVQQLEDEFYRFVAADEVAEHLQLPLEMVDILFQYWKLKRKVNFNQPLIMPKKEEEDSLARRE 478

  Fly   363 QK-RKRKTRVIADDEQGEYLEKMSVRGLD--IARYEHIIDGVAYCLVCAKNDIFKTFKNKYSFQR 424
            |: ..|:.|:.....|.  ||:  ||.|.  ::|.|.|           |..:.:.  .:..|..
Zfish   479 QEVLLRRLRLFTHLRQD--LER--VRNLTYMVSRRERI-----------KRTLCRV--QEQIFHH 526

  Fly   425 HAYLFHEGQ------NRKIFAC--------PI----------C--NKEFSRPDK-MKMHKKDKHG 462
            |..|..:|:      .|::...        |:          |  |...|..:| ...::..||.
Zfish   527 HVRLLEQGRVTGVSSTRRLEEAMFYFRTTPPVPASPQPLKGHCGQNSTLSSSEKGSNSYRSSKHI 591

  Fly   463 DVPMPPSATTTPLKADGPPAK----RARTARTPRVR----KTKDGSTPTKKRLAQIDSVLDDVQN 519
            :...|     ..:..||.|:.    |:.|..:...|    :|:.|.:..|:.  :.:..|:| :.
Zfish   592 EADKP-----AKMLMDGVPSSGDSVRSETVMSASSRRSEGRTRSGESHRKEE--ESERPLED-RR 648

  Fly   520 GESLTMAPVSVSHSQQQQQQQIQHSIT---TLAPSTPSQPQHQLQTLPSLDFSGMILPGGAQLAL 581
            .:|.....||:       :.:::|:.:   ||:..|      :|.|:..            :|.|
Zfish   649 RKSKLWDQVSI-------KDKLRHAKSMEDTLSSET------ELDTMDD------------RLLL 688

  Fly   582 ANPGATSSVGLQRGPATPNGQPAPPTTTLIYSNQLELQQALLQQQLQGQSIMIQDQAGNLVPLQL 646
            ::..|.|..      ..||          :||.......|..|              |.|||   
Zfish   689 SHTNANSVA------TAPN----------MYSGSPRKTNASHQ--------------GKLVP--- 720

  Fly   647 DGTQAIYT------TAPQAQRQQTTATYQTTQQQQQQPAQQ 681
            :||...:.      ..|: :.::|:|..||.:|:....|.|
Zfish   721 NGTSGRHLKNWGSFRIPK-RSERTSAGRQTERQEADNTADQ 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370 4/25 (16%)
jade1NP_956099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
EPL1 <104..173 CDD:287484
PHD_JADE1 198..243 CDD:277149
ePHD_JADE 251..361 CDD:277141 4/11 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..408 8/39 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..651 19/102 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 697..829 20/98 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.