DRSC/TRiP Functional Genomics Resources

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Protein Alignment seq and jade3

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_970614.2 Gene:jade3 / 322209 ZFINID:ZDB-GENE-030131-928 Length:795 Species:Danio rerio


Alignment Length:765 Identity:125/765 - (16%)
Similarity:234/765 - (30%) Gaps:261/765 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 TTTGEDGQTPTTIVFENYNGGMPAVSSAAPTPVPVSQANAPATTTTTALVNTDGTIIEFDGSTY- 236
            ::...|.::|:|....|..|..|.        .|.|....||......|::.    ::...|.: 
Zfish     9 SSDSSDNESPSTSFSSNKYGSKPG--------TPASAQKKPAEVFRKDLISA----MKLPDSHHI 61

  Fly   237 --EEYHVLKS------EPG-----SSDCLSNGSSAVAA----DIIKYDPQHGVVGDEEDDDENGM 284
              |:|::|..      |.|     |.|.:...|..:..    :::...|:..:....:|..|.|.
Zfish    62 SSEDYYLLADTWKQEWEKGVQVLASPDTIPQPSVRIITEKPKEVLFSKPRKYIQCWSQDSTETGY 126

  Fly   285 LHVK---------------------------------YEEQSLE----------HDPENEHDAEQ 306
            :::|                                 .:|.::|          |:..| |..|.
Zfish   127 VNIKELAEAMCRYDLDDMDLYWLQQLNAELGMMGDGVVDELTMERVMEALERQCHENMN-HAIET 190

  Fly   307 EH----EYEEYQVIKA-----------EVEAEAAELAAGTTSYTISQEQTGS--------GNTVL 348
            |.    ||:|..:...           .|..:...:......|.|.:...|:        |.|..
Zfish   191 EEGLGIEYDEDVICDVCRSPDSEEGNDMVFCDKCNICVHQACYGIVKVPDGNWLCRTCVLGITPQ 255

  Fly   349 SSMVPKSGSAAAAKQKRKRKTRV----------IADDEQGEYLEKMSVRGLDIARYEHIID---- 399
            ..:.||:|.|..|.:...:...|          ||..|:.|.:.|:|  .:..:|:..|..    
Zfish   256 CLLCPKTGGAMKATRAGTKWAHVSCALWIPEVSIACPERMEPITKVS--HIPPSRWSLICSLCKL 318

  Fly   400 GVAYCLVCAKNDIFKTFKNKYSFQRHAY----LFHEGQNRKIFACPICNKEFSRPDKMKMHKKDK 460
            ....|:.|:..:....|....:|: |:.    :..||...|..:  .|.|          |.|.|
Zfish   319 KTGACIQCSVKNCTIPFHVTCAFE-HSLEMKTILDEGDEVKFKS--YCLK----------HSKPK 370

  Fly   461 HGDVPMPPSATTTPLKADGPPAKRARTARTPRVRKTK--------------DGSTP--------- 502
            .|:..:.|:....|.:.|      ..:.|..::::.:              |.|.|         
Zfish   371 AGEPGLSPARHKPPTETD------KLSLRAQKLQELEEEFYTYVHPEEVAHDLSLPLHLLDFIFQ 429

  Fly   503 --TKKRLAQID-SVLDDVQNGESLTMAP----------------------------------VSV 530
              ..||.:..: ::|...::.|:|.:.|                                  :.:
Zfish   430 YWKMKRKSNFNKALLPPKEDEENLLLQPQEDSIHTRMRMFMHLRQDLERVRNLCYMVSRREKLKL 494

  Fly   531 SHSQQQQQ------QQIQHSITTLAPSTPSQPQHQLQTLPSLDFSGMILPGGAQLALANPGATSS 589
            |.|:.|:|      :.:...::...|.:.|.........|.:... :.:|   ::.|.|..::|.
Zfish   495 SQSKAQEQIFNLHVKLVNQELSAGLPVSSSIENLLFHPPPRITLK-LKMP---KVQLGNGKSSSK 555

  Fly   590 VGLQRGPATPN-------------GQPAPPTTTLIYSNQLELQQALLQQQLQG---QSIMIQDQA 638
            .|  .||..|:             ||..|         ||.|.:..:::::.|   .||.|:...
Zfish   556 SG--NGPLCPDNSCNLYDTSEGGIGQGKP---------QLHLGRQRIEERINGILPASIYIRRDG 609

  Fly   639 GNLVPLQLDGTQAIYTTAPQAQRQQTTATYQTTQQQQQQPAQQPAGQAQQQPHYELDNVTYLSST 703
            |               |.|.|.:|.............|....:...:|::....:.:.:  |...
Zfish   610 G---------------TPPLAVKQSGKPLALHAALHGQSSNGKTKNEAEKTRQIKSNGI--LDKP 657

  Fly   704 AAATPTSAEQQQQQQQQQHVIGTVQSYQILTPDG-----LQNFQPKLETA 748
            .....||.....::..:..:.|..|      |.|     |::|...|:.|
Zfish   658 ILQRDTSCLAASEKDPRSEISGKSQ------PSGFHKTSLEHFSRSLKEA 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370 5/29 (17%)
jade3NP_970614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 8/39 (21%)
EPL1 <89..178 CDD:287484 8/88 (9%)
COG5141 139..555 CDD:227470 67/441 (15%)
PHD_JADE3 203..252 CDD:277151 4/48 (8%)
ePHD_JADE3 256..366 CDD:277176 24/124 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 630..654 2/25 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 667..687 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 714..795
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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