DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment seq and Jade1

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:XP_006232363.1 Gene:Jade1 / 310352 RGDID:1306920 Length:847 Species:Rattus norvegicus


Alignment Length:535 Identity:92/535 - (17%)
Similarity:157/535 - (29%) Gaps:215/535 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KFEGKIPK----------LSQTSAATGGATAAAEAS---------------------TSKSSQGQ 39
            ||:...||          |.:.:|...|||..:..|                     ..|..|.:
  Rat   375 KFKSYCPKHSSHRKPEESLGEGAAQENGATECSPQSPLEPFASLEQNREEAHRVSVRKQKLQQLE 439

  Fly    40 QQQIVYVNMLPAANTLNGIPQQQQQQQYASTDGNVYQLQNEILCDANGHAVTAATASYQTTASSP 104
            .:...:||:|..|..|. :|::.....|     ..::|:.:|  :.|...:|             
  Rat   440 DEFYTFVNLLDVARALR-LPEEVVDFLY-----QYWKLKRKI--NFNKPLIT------------- 483

  Fly   105 QQQQQQQQQQQNVATSVADNVVTTISSSSILHTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHY 169
                .::.::.|:|....|.:...:  ....|...:...|..|.....::::.::...:.|:|.:
  Rat   484 ----PKKDEEDNLAKREQDVLFRRL--QLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIF 542

  Fly   170 HYITTTGEDGQTPTTIVFENYNGGMPAVSSA--------APTPVPVSQANAP------------- 213
            .......|.|:.          .|:|:..|:        :|:..|    |.|             
  Rat   543 SLYAKLLEQGKV----------SGVPSSCSSLENMLLFNSPSVGP----NVPKIEDLKWHSAFFR 593

  Fly   214 ------------ATTTTTALVNTDGTIIEFDGSTYEEYHVLKSEPGSSDCLSNGSSAVAADIIKY 266
                        .:....||.|:.||    :|.|      |..:||.|.  ....|.|...::.:
  Rat   594 KQMGTNLVHSLKKSHKRDALQNSSGT----EGKT------LLKQPGLSG--RREGSGVPESLLSF 646

  Fly   267 D--------------------PQHG-----------VVGDEEDDDENGMLHVKYEEQSLEHDPEN 300
            :                    |.||           |.||.:|         |..:||  |.|..
  Rat   647 EKTFAEARLISSAQQKNGVVTPDHGKRRDNRFHCDLVKGDLKD---------KSFKQS--HKPLR 700

  Fly   301 EHDAEQEHEYEEYQVIKAEVEAEAAELAAGT-------TSYTISQEQTGSGNTVLS---SMVPKS 355
            ..|..|.|    ....:|.......:.|.||       .:.::.:..|...:.|.|   ..:||.
  Rat   701 STDTSQRH----LDNTRAATSPGVGQSAPGTRKEIVPKCNGSLVKVPTTPASPVKSWGGFRIPKK 761

  Fly   356 G------------------------SAAAAKQKRKRKTRVIAD-----------DEQGEYLEKMS 385
            |                        |.|.||::.|.:.|..::           |.:.|..||..
  Rat   762 GERQQQGEAHDGACHQHSDCSHLGISRAPAKERSKSRLRTDSENDGYAPDGEMSDSESEASEKKC 826

  Fly   386 V-------RGLDIAR 393
            :       |..||.|
  Rat   827 IHASSTISRRTDIIR 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370
Jade1XP_006232363.1 EPL1 <107..195 CDD:287484
PHD_JADE1 220..265 CDD:277149
ePHD_JADE1 270..387 CDD:277174 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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