Protein Alignment seq and Kdm4b

DIOPT Version :9

• Sequence 1: NP_001027415.1
• Gene: seq / 3772396
• FlyBaseID: FBgn0028991
• Length: 882
• Species: Drosophila melanogaster
• Sequence 2: NP_001037701.2
• Gene: Kdm4b / 301128
• RGDID: 1588576
• Length: 1099
• Species: Rattus norvegicus
• Alignment Length: 422
• Identity: 65/422 - (15%)
• Similarity: 115/422 - (27%)
• Gaps: 153/422 - (36%)

  Fly   102 SSPQQQQQQQQQQQNVATSVADNVVTTISSSSILHTNANTNGVD-TLAATQQQQQQQQQQQQQQQ 165
            |.|::.:.:..:....||                   |...|:| ....::::...:::::::..
  Rat   412 SQPKKSKPEDSRSPGEAT-------------------AGVAGLDEARGCSRRETMPEEEEEEELS 457

  Fly   166 QQHYHYITTTGEDGQTPTTIVFENYNGGMPAVSSAAPTPVPVSQANAPATTTTTALVNTDGTIIE 230
            ....|......|||:            |.|..:.|.......|..:.|..:...||...
  Rat   458 PSQGHEAEGVEEDGR------------GKPRPTKARSKKKTPSLLSPPLLSAPPALFPA------ 504

  Fly   231 FDGSTYEEYHVLKSEPGSSD------CLSNGSSAVAADIIKYDPQHGVVGDE------------- 276
                  ||...|..:|.|..      ....|....|.:::    ..||.|:|
  Rat   505 ------EEVLRLPPQPKSPGPAMGPMAAEGGPPPTALNVV----PPGVPGEETEVRPRPIIPMLY 559

  Fly   277 -------EDDDENGMLHVKYEEQSLEHDPENEHDAEQEHEYEEYQVIKAEVEAE----------- 323
                   .|.|.....|.:.....|..:.|::..|........:..:|.|::..
  Rat   560 VLPRANSSDGDREHAAHPQLAPMELGPEEEDQAQAGDSQGTTSFSKLKVEIKKSRRHPLGRPPTR 624

  Fly   324 ------AAELAAGTTSYTISQEQTGSGNTVLSSMVPKSGSAAAAKQKRKRKTRVIADDEQGEYLE 382
                  ..|.::...::..|.|..||....|.|::.....:.||..:.:||....|...:
  Rat   625 SPLSVVKQEASSDEEAFPFSGEDDGSDPEALRSLLSLQWKSKAASFQAERKLNAAAALSE----- 684

  Fly   383 KMSVRGLDIARYEHIIDGVAYCLVCAKNDIFKTFKNKYSFQRHAYLFHEGQNRKIFACPICNKEF 447
                               .||.||.   :|..:......:           |::.|.|
  Rat   685 -------------------PYCAVCT---LFYPYSQSVQTE-----------REVLATP------ 710

  Fly   448 SRPDKMKMHKKDKHGD-VPMPPSAT---TTPL 475
                          || ...|||.:   |.||
  Rat   711 --------------GDSAVQPPSKSGQRTRPL 728

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
seq	NP_001027415.1	C2H2 Zn finger	404..430	CDD:275370	4/25 (16%)
Kdm4b	NP_001037701.2	JmjN	15..56	CDD:128818
		JmjC	176..292	CDD:396791
		AvrE	475..>671	CDD:338078	34/211 (16%)
		PHD_SF	686..789	CDD:419867	16/77 (21%)
		ePHD_JMJD2B	798..907	CDD:277184
		Tudor_JMJD2B_rpt1	920..973	CDD:410535
		Tudor_SF	977..1032	CDD:413384

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5141
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900