DRSC/TRiP Functional Genomics Resources

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Protein Alignment seq and Jade1

DIOPT Version :9

Sequence 1:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster
Sequence 2:XP_006500847.1 Gene:Jade1 / 269424 MGIID:1925835 Length:849 Species:Mus musculus


Alignment Length:495 Identity:89/495 - (17%)
Similarity:151/495 - (30%) Gaps:180/495 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KFEGKIPK----------LSQTSAATGGATAAAEAS---------------------TSKSSQGQ 39
            ||:...||          |.:.:|...||..::..|                     ..|..|.:
Mouse   376 KFKSYCPKHSSHRKPEEGLGEGAAQENGAPESSPQSPLEPYGSLEPNREEAHRVSVRKQKLQQLE 440

  Fly    40 QQQIVYVNMLPAANTLNGIPQQQQQQQYASTDGNVYQLQNEILCDANGHAVTAATASYQTTASSP 104
            .:...:||:|..|..|. :|::.....|     ..::|:.:|  :.|...:|             
Mouse   441 DEFYTFVNLLDVARALR-LPEEVVDFLY-----QYWKLKRKI--NFNKPLIT------------- 484

  Fly   105 QQQQQQQQQQQNVATSVADNVVTTISSSSILHTNANTNGVDTLAATQQQQQQQQQQQQQQQQQHY 169
                .::.::.|:|....|.:...:  ....|...:...|..|.....::::.::...:.|:|.:
Mouse   485 ----PKKDEEDNLAKREQDVLFRRL--QLFTHLRQDLERVRNLTYMVTRREKIKRSVCKVQEQIF 543

  Fly   170 HYITTTGEDGQTPTTIVFENYNGGMPAVSSAA---------PTPVPVSQANAPATTTT------- 218
            ...|...|..:.          .|:|:..|:|         |:..|    |||.....       
Mouse   544 TQYTKLLEQEKV----------SGVPSSCSSALENMLFFNSPSVGP----NAPKIEDLKWHSAFF 594

  Fly   219 -----TALV-------------NTDGTIIEFDGSTYEEYHVLKSEPG----------SSDCLSNG 255
                 |:||             |:.||    :|.|..:      :||          |...||..
Mouse   595 RKQMGTSLVHPLKKSHKRDAVQNSSGT----EGKTSHK------QPGLCGRREGLEVSESLLSLE 649

  Fly   256 SSAVAADIIKYDPQ-HGVV----GDEED-----DDENGMLHVKYEEQSLEHDPENEHDAEQEHEY 310
            .:...|.::....| :|||    |...|     |...|.|..|..:||  |.|....|..|.|  
Mouse   650 KTFAEARLLSSAQQKNGVVTPDHGKRRDNRFHCDLVKGDLKDKSFKQS--HKPLRSTDTSQRH-- 710

  Fly   311 EEYQVIKAEVEAEAAELAAGTTSYTISQEQTGSGNTVLSSM-------------VPKSG------ 356
              ....:|.......:.|.||....:.:   .:|:.|...:             :||.|      
Mouse   711 --LDNTRAATSPGVGQSAPGTRKEIVPK---CNGSLVKVPITPASPVKSWGGFRIPKKGERQQQG 770

  Fly   357 ----------------SAAAAKQKRKRKTRVIADDEQGEY 380
                            ..:.|..|.:.|:|:.||.|...|
Mouse   771 EAHDGACHQHSDCSHLGVSRAPAKERAKSRLRADSENDGY 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370
Jade1XP_006500847.1 COG5141 115..>543 CDD:227470 30/193 (16%)
ePHD_JADE 274..384 CDD:277141 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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