Sequence 1: | NP_001027415.1 | Gene: | seq / 3772396 | FlyBaseID: | FBgn0028991 | Length: | 882 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011511944.1 | Gene: | LIMCH1 / 22998 | HGNCID: | 29191 | Length: | 1655 | Species: | Homo sapiens |
Alignment Length: | 993 | Identity: | 180/993 - (18%) |
---|---|---|---|
Similarity: | 322/993 - (32%) | Gaps: | 286/993 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 QGQQQQIVYVNMLPAAN---TLNGIPQQ-QQQQQYASTDGN---------------VYQLQNEIL 82
Fly 83 CDANGHAVTAATASYQTTASSPQQQQQQQQQQQNVATSVADNVVTTISSSSILHTNANTNGVDTL 147
Fly 148 AATQQQQQQQQQQQQQQQQQHYHYITTTGEDGQTPTTIVFENYNGGMPAVSSAAPTPVPVSQANA 212
Fly 213 PATTTTTALVNTDGTIIEFDGSTYEEYHVLKSEPGSSDCLSNGSSAVAADIIKYDPQ----HGVV 273
Fly 274 GDEEDDDENGMLHVKYEEQSLEHDPENEHDAEQEHE-YEEYQVIKAEVEAEAAELAAGTTSYTIS 337
Fly 338 Q------------EQTGSGNTVLSSMVPKSGSAAAAKQKRKRKTRVIADDEQGEYLEKMSVRGLD 390
Fly 391 IA--------------RYEHIIDGVAYCLVCAKNDIFKTFK--NKYSFQRHAYLFHEGQNRKIFA 439
Fly 440 CPICNKEFSRPDKM------KMH------KKD---------KHGDVPMPPSATTTPL-------K 476
Fly 477 ADGPPAKRAR---------------TARTPRVRKTKDGSTPTKKRLAQIDSVLDDVQNGESLTMA 526
Fly 527 PVSVSHSQQQQQQQIQHSIT----------TLAPSTPSQPQHQLQTLPSLDFSGMILPGGAQLAL 581
Fly 582 ANPGATSSVGLQRGPATPNGQPAPPTTTLIYSNQLELQQALLQQQLQGQSIMIQDQAGNLVPLQL 646
Fly 647 DGTQAIYTTAPQAQR-------QQTTATYQTTQQQQQQPAQQPAGQAQ------QQPHYELDN-- 696
Fly 697 -------VTYLSSTAAATPTSAEQQQQQQQQQHV-IGTVQ----------SYQILTPDGLQNFQP 743
Fly 744 KLETAELGDLC---------PYSQ-----YTFTTHAGA----------------QPTLNAN---- 774
Fly 775 -------ALDAQTQHQQHHQQQQHHHQQQQHHQQTQLLQQQPFATHHNPHQQFMELKNELLIKG- 831
Fly 832 ------GDAYTLDTASMY 843 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
seq | NP_001027415.1 | C2H2 Zn finger | 404..430 | CDD:275370 | 7/27 (26%) |
LIMCH1 | XP_011511944.1 | CH | 26..138 | CDD:237981 | |
DUF4757 | 250..>311 | CDD:292571 | |||
DUF4757 | 813..961 | CDD:292571 | 33/172 (19%) | ||
GBP_C | <1340..1377 | CDD:303769 | 6/36 (17%) | ||
LIM | 1585..1642 | CDD:214528 | 4/22 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR15551 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |