DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11566 and Cacng3

DIOPT Version :9

Sequence 1:NP_001027081.1 Gene:CG11566 / 3772393 FlyBaseID:FBgn0031159 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_542422.1 Gene:Cacng3 / 140724 RGDID:628803 Length:315 Species:Rattus norvegicus


Alignment Length:117 Identity:27/117 - (23%)
Similarity:45/117 - (38%) Gaps:26/117 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 TEIYPASSSAPAPPSAQMKRKQQRNMATNTNTK----IS---NNPPSSNSQM----ADQSRLCGL 287
            :|:...|:.|..||.....|::..:.:|...::    ||   :..||::..|    .|.|:|. :
  Rat   213 SELLKKSTFARLPPYRYRFRRRSSSRSTEPRSRDLSPISKGFHTIPSTDISMFTLSRDPSKLT-M 276

  Fly   288 KRGLRKTKDELFQEFCRRAGMRSKPKNIYYISGGDEAEEEEQEDQAKREEVP 339
            ...|...:|..|.:|     ..|.||         |.:|....:.|.|...|
  Rat   277 GTLLNSDRDHAFLQF-----HNSTPK---------EFKESLHNNPANRRTTP 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11566NP_001027081.1 None
Cacng3NP_542422.1 PMP22_Claudin 6..196 CDD:419754
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..253 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M76
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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