DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11566 and cacng8b

DIOPT Version :9

Sequence 1:NP_001027081.1 Gene:CG11566 / 3772393 FlyBaseID:FBgn0031159 Length:590 Species:Drosophila melanogaster
Sequence 2:XP_001342922.4 Gene:cacng8b / 100003329 ZFINID:ZDB-GENE-100921-72 Length:422 Species:Danio rerio


Alignment Length:208 Identity:39/208 - (18%)
Similarity:67/208 - (32%) Gaps:66/208 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 LNLYLHNDLE-----RRFYFEKPAVSKCNLHSRSFAKSLNELCTDTSVSSTHVPAPL-------- 203
            :|:|:..:.|     |...|:....:...|.|..|.:........|..|.:..|:|:        
Zfish   204 VNIYIEKNKELRCRTRTDIFKSTTHAMLRLPSYRFRRRSRSSSRSTDPSRSRDPSPVGGPPGGKN 268

  Fly   204 --LPSAADPLPAPALFADLPQEF------------------------------PLTRSVSTATEI 236
              :|.:|.....|...:.||...                              ||..:|..|| :
Zfish   269 FGMPPSALLSQGPISVSTLPNPHSRSALPGGDISLYTLSRDPKLGGIGGLGAPPLYGTVDRAT-L 332

  Fly   237 YPASSSAPAP-----------PSAQMKRKQQRNMATNTNTKISNNPPSS-----NSQMADQSRLC 285
            |...:..|..           ||.:.........::|:|..:||:.|||     :|...::.|..
Zfish   333 YQLHNCFPKEGGGGMMMSGTLPSLKSHNPSGVQNSSNSNAPLSNSVPSSQPPPFSSSTGERDRGM 397

  Fly   286 G----LKRGLRKT 294
            |    |.:|.|::
Zfish   398 GTLDRLGKGDRES 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11566NP_001027081.1 None
cacng8bXP_001342922.4 PMP22_Claudin 5..203 CDD:328820
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M76
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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