DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32270 and ela3l

DIOPT Version :10

Sequence 1:NP_728837.1 Gene:CG32270 / 3772375 FlyBaseID:FBgn0052270 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_021331840.2 Gene:ela3l / 554107 ZFINID:ZDB-GENE-060710-2 Length:270 Species:Danio rerio


Alignment Length:271 Identity:71/271 - (26%)
Similarity:127/271 - (46%) Gaps:28/271 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MFWMLWIRESVAEELELRRSP------RIVGGHPSDVWHQPHMVNIRRRGN----FECGGSLVTP 63
            ||.::.....:|......:.|      |:|.|..:.....|..|:::.:..    ..||||::..
Zfish     1 MFALILASVLIASAFGCGKPPIEPLMSRVVNGEEARPHSWPWQVSLQYQSGSSFYHTCGGSIIAE 65

  Fly    64 RCVLTAAHCLNDG-NPSDFVVRGGVTYLSDMRNSRYVRKILMPSAYSR--TTLDHDVALLQLKQP 125
            ..|:|||||::.| |....|.:..::...:...:...:||::...::.  ..|.:|:||::|.:|
Zfish    66 NWVMTAAHCISSGRNYRVLVGKHDLSVNEEGSQTISAQKIIVHEKWNSMFVALGNDIALIKLAEP 130

  Fly   126 LQASIAKPISLAVRSPRPGSFV------RVSGWGLTDSSSTSLPNQLQSVHVQVMPQRECRDLYR 184
            :  :::..|.|.. .|.||..:      .:||||.. |:..:||::||...:..:....|.....
Zfish   131 V--TLSDTIQLGC-VPAPGDVLPNNYPCYISGWGRL-STGGALPDKLQQALMPAVDHATCSRFDW 191

  Fly   185 GYRNITSSMFCASVPGLKDACAGDSGGPV--VNSNGI--LVGVVSWGRAHRCAARDSPGVYSDVS 245
            ...::..:|.||...|:...|.||||||:  .||:||  :.|:.|:.....|.....|.|::.||
Zfish   192 WGSSVKETMVCAGGDGVVAGCNGDSGGPLNCKNSDGIWEVHGIASFVSGLGCNTIRKPTVFTRVS 256

  Fly   246 YLSDWIADNIH 256
            ..:||: |.:|
Zfish   257 SFTDWV-DKVH 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32270NP_728837.1 Tryp_SPc 30..251 CDD:214473 64/237 (27%)
ela3lXP_021331840.2 None

Return to query results.
Submit another query.