DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32270 and CG11836

DIOPT Version :10

Sequence 1:NP_728837.1 Gene:CG32270 / 3772375 FlyBaseID:FBgn0052270 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001356925.1 Gene:CG11836 / 43007 FlyBaseID:FBgn0039272 Length:333 Species:Drosophila melanogaster


Alignment Length:245 Identity:100/245 - (40%)
Similarity:129/245 - (52%) Gaps:25/245 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGHPSDVWHQPHMVNIRRRGNFECGGSLVTPRCVLTAAHCLNDGNPSDFVVRGG-----VTY 89
            |||||.|:.|...|.|..|...|.|.|||||:|...||:||||:.....|...|..|     :|.
  Fly    96 RIVGGKPTGVNQYPWMARIVYDGKFHCGGSLLTKDYVLSAAHCVKKLRKSKIRVIFGDHDQEITS 160

  Fly    90 LSDMRNSRYVRKILMPSAYSRTTLDHDVALLQLKQPLQAS-IAKPISLAVRSPR-----PGSFVR 148
            .| ....|.|..::...::...|.::|:|||:|::|:..| |.|||.|    ||     .|....
  Fly   161 ES-QAIQRAVTAVIKHKSFDPDTYNNDIALLRLRKPISFSKIIKPICL----PRYNYDPAGRIGT 220

  Fly   149 VSGWGLTDSSSTSLPNQLQSVHVQVMPQRECRD-LYRGYRNITSSMFCASVPGLKDACAGDSGGP 212
            |.|||.| |....||:.:..|.|.:|...|||: .|:..| |||||.||..|.: |:|.||||||
  Fly   221 VVGWGRT-SEGGELPSIVNQVKVPIMSITECRNQRYKSTR-ITSSMLCAGRPSM-DSCQGDSGGP 282

  Fly   213 VVNSNGI---LVGVVSWGRAHRCAARDSPGVYSDVSYLSDWIADNIHRYC 259
            ::.|||:   :||:||||..  |.....|||||.||....||..|:...|
  Fly   283 LLLSNGVKYFIVGIVSWGVG--CGREGYPGVYSRVSKFIPWIKSNLENTC 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32270NP_728837.1 Tryp_SPc 30..251 CDD:214473 96/235 (41%)
CG11836NP_001356925.1 Tryp_SPc 97..325 CDD:238113 97/237 (41%)

Return to query results.
Submit another query.