DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32270 and svh-1

DIOPT Version :10

Sequence 1:NP_728837.1 Gene:CG32270 / 3772375 FlyBaseID:FBgn0052270 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:254 Identity:76/254 - (29%)
Similarity:124/254 - (48%) Gaps:33/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AEELELRRSPRIVGGHPSDVWHQPHMVNIRRRGN--FECGGSLVTPRCVLTAAHCL-NDGNPSDF 81
            |.:....|..|:|||..:.....|....:|.:..  ..||.|::....::|||||. .|...|.:
 Worm   702 ARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSY 766

  Fly    82 VVRGGVTYLSDMRNSR--------YVRKILMPSAYSRTTLDHDVALLQLKQP-LQAS-IAKPISL 136
            .|     .:.|..|::        |:::|.....| :....||:|:|::..| ::.: .|:||.|
 Worm   767 EV-----VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICL 825

  Fly   137 AVRS--PRPGSFVRVSGWGLTDSSSTSLPNQLQSVHVQVMPQRECRDLYRGYRNITSSMFCAS-V 198
            ..:.  ..||....|||||   |.......:||:..:.::.:.:|.:..:.|.:::.|.|||. :
 Worm   826 PSKDFVYTPGRQCVVSGWG---SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYL 887

  Fly   199 PGLKDACAGDSGGPVV--NSNG--ILVGVVSWGRAHRCAARDSPGVYSDVS-YLSDWIA 252
            .|..|:|.||||||..  ..:|  :|.||:|||..  ||.:..||:|:.|: ||| ||:
 Worm   888 EGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDG--CAQKKQPGIYTMVAPYLS-WIS 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32270NP_728837.1 Tryp_SPc 30..251 CDD:214473 72/241 (30%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 73/243 (30%)
Blue background indicates that the domain is not in the aligned region.

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