DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2A:CG33841 and H2al2c

DIOPT Version :10

Sequence 1:NP_001027346.1 Gene:His2A:CG33841 / 3772360 FlyBaseID:FBgn0053841 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001171040.1 Gene:H2al2c / 547210 MGIID:3779546 Length:111 Species:Mus musculus


Alignment Length:106 Identity:39/106 - (36%)
Similarity:57/106 - (53%) Gaps:10/106 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIP 80
            :.|.||.|||||.|:.|.|.:|.|:.|:.:.|.|:|..|:|||...:|.|||.....:...||.|
Mouse    14 THSQRAELQFPVSRVDRFLGEGIYSRRLSSSALVFLVGVLEYLTPNILGLAGEVTHTSGMKRIAP 78

  Fly    81 RHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTE 121
            .|:...::|.|:|::|..     |||.     :|..|.:.|
Mouse    79 EHVCQVVQNKEQLHQLFK-----QGGT-----SVFEPPEPE 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33841NP_001027346.1 PTZ00017 16..124 CDD:185399 39/106 (37%)
H2al2cNP_001171040.1 HFD_H2A 14..96 CDD:467020 33/81 (41%)

Return to query results.
Submit another query.