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Protein Alignment His2A:CG33841 and Macroh2a1
DIOPT Version :10
| Sequence 1: | NP_001027346.1 |
Gene: | His2A:CG33841 / 3772360 |
FlyBaseID: | FBgn0053841 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_006253635.1 |
Gene: | Macroh2a1 / 29384 |
RGDID: | 621462 |
Length: | 372 |
Species: | Rattus norvegicus |
| Alignment Length: | 123 |
Identity: | 79/123 - (64%) |
| Similarity: | 93/123 - (75%) |
Gaps: | 2/123 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65
||.| |||.|....|||.:||:.|||||:.|.::||:...|:|.|||||:|||:|||.||:|||
Rat 1 MSSR--GGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63
Fly 66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
||||||||||.|:.|||:.||:.||||||:||.|||||.|||||||...||.||...|
Rat 64 AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSK 121
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| His2A:CG33841 | NP_001027346.1 |
PTZ00017 |
16..124 |
CDD:185399 |
72/108 (67%) |
| Macroh2a1 | XP_006253635.1 |
H2A |
14..119 |
CDD:197711 |
71/104 (68%) |
| Macro_H2A-like |
178..368 |
CDD:394875 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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