DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33817 and GAMMA-H2AX

DIOPT Version :9

Sequence 1:NP_001027306.1 Gene:His2A:CG33817 / 3772351 FlyBaseID:FBgn0053817 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_175868.1 Gene:GAMMA-H2AX / 841910 AraportID:AT1G54690 Length:142 Species:Arabidopsis thaliana


Alignment Length:124 Identity:93/124 - (75%)
Similarity:103/124 - (83%) Gaps:3/124 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGRGKGGKVKGKAK---SRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVL 63
            ||..|||:.|.||.   |||::||||||||||.|.|:.|.|||||||||||||:||:||||||||
plant     7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVL 71

  Fly    64 ELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEK 122
            |||||||||||||||:|||:|||:||||||:|||..||||.|||||||...|||.|..|
plant    72 ELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGK 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33817NP_001027306.1 PTZ00017 16..124 CDD:185399 85/107 (79%)
GAMMA-H2AXNP_175868.1 PLN00156 4..142 CDD:215080 93/124 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 132 1.000 Domainoid score I1660
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I1426
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm981
orthoMCL 1 0.900 - - OOG6_100077
Panther 1 1.100 - - O PTHR23430
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X55
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.870

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