DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33817 and H2al1j

DIOPT Version :10

Sequence 1:NP_001027306.1 Gene:His2A:CG33817 / 3772351 FlyBaseID:FBgn0053817 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_001108001.1 Gene:H2al1j / 236663 MGIID:3643273 Length:109 Species:Mus musculus


Alignment Length:88 Identity:33/88 - (37%)
Similarity:55/88 - (62%) Gaps:3/88 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRII 79
            ::.|.|.  :||:..:.|.|.:||::.|:.:.|||.|.:|:|||::.:|||||..|....:.||.
Mouse    13 RTHSQRG--EFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIA 75

  Fly    80 PRHLQLAIRNDEELNKLLS-GVT 101
            |..:.|.::|:|:|.:|.. |.|
Mouse    76 PEDVGLVVQNNEQLCQLFKPGAT 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33817NP_001027306.1 PTZ00017 16..124 CDD:185399 33/87 (38%)
H2al1jNP_001108001.1 HFD_H2A 21..94 CDD:467020 29/72 (40%)

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