DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tyler and MTM1

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_011773.3 Gene:MTM1 / 853173 SGDID:S000003489 Length:366 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:108/439 - (24%)
Similarity:182/439 - (41%) Gaps:152/439 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QQVVSALVGGLITTFVVTPLEVVKTRVQTQHAI--------RQRPTV----SKLCYVYHNGLMTH 99
            ::::||..|.::|:.::||::||:.|:|.|..|        .:.|..    ||:      ...|:
Yeast    14 ERMLSAGAGSVLTSLILTPMDVVRIRLQQQQMIPDCSCDGAAEVPNAVSSGSKM------KTFTN 72

  Fly   100 V---------------------CRSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAG 143
            |                     |::|.:             ...|.::||.||....|.:.||.|
Yeast    73 VGGQNLNNAKIFWESACFQELHCKNSSL-------------KFNGTLEAFTKIASVEGITSLWRG 124

  Fly   144 LSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSA 208
            :|.||:.|:|:.::||..||||::                                         
Yeast   125 ISLTLLMAIPANMVYFSGYEYIRD----------------------------------------- 148

  Fly   209 TAPVSTASLPYYVPMASGICSRTIVVTAITPIEMVRIKMQS--EYMTYAELWRVLRSLI----RQ 267
            .:|:: ::.|...|:..|..:|....|:|.|:|:|:.|:||  ......:.|.:::.|:    ::
Yeast   149 VSPIA-STYPTLNPLFCGAIARVFAATSIAPLELVKTKLQSIPRSSKSTKTWMMVKDLLNETRQE 212

  Fly   268 HGILG----LWRGWPPTVMRDAPFSGTYWAVYEAIKR-------AFSVTEPT---FLFSFLTGAI 318
            ..::|    |::|...|:.||.|||..||:.||..|.       .|:..:..   |:.||.:|.|
Yeast   213 MKMVGPSRALFKGLEITLWRDVPFSAIYWSSYELCKERLWLDSTRFASKDANWVHFINSFASGCI 277

  Fly   319 SGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRPSVLSR 383
            ||.:|...|.|||:..|..||                               |.:.||.|...:|
Yeast   278 SGMIAAICTHPFDVGKTRWQI-------------------------------SMMNNSDPKGGNR 311

  Fly   384 MRQ-------IYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYSKSFF 425
            .|.       |:|.:|:..||.|:..|::::.|:||||||::|.||..|
Yeast   312 SRNMFKFLETIWRTEGLAALYTGLAARVIKIRPSCAIMISSYEISKKVF 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 39/156 (25%)
Mito_carr 216..302 CDD:278578 28/102 (27%)
Mito_carr 306..429 CDD:278578 39/130 (30%)
MTM1NP_011773.3 Mito_carr 14..149 CDD:278578 39/194 (20%)
Mito_carr 154..255 CDD:278578 28/100 (28%)
Mito_carr 264..364 CDD:278578 39/128 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341333
Domainoid 1 1.000 71 1.000 Domainoid score I2242
eggNOG 1 0.900 - - E1_KOG0761
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1011
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53824
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - otm46805
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1001
TreeFam 1 0.960 - -
1211.860

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