DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tyler and MTM1

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_567790.1 Gene:MTM1 / 828907 AraportID:AT4G27940 Length:413 Species:Arabidopsis thaliana


Alignment Length:419 Identity:100/419 - (23%)
Similarity:167/419 - (39%) Gaps:120/419 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QQVVSALVGGLITTFVVTPLEVVKTRVQTQ-------HAIRQRPTVSKLCYVYHNGLMTHVCRSS 104
            ::|.||....:::...:.||:|||||:|.|       |.:..  ::.::.:...| :|....|.|
plant    63 ERVFSAAGAAVLSAVTLNPLDVVKTRLQAQAAGMSYSHPLSN--SIGRMAFFGPN-MMFADLRCS 124

  Fly   105 DICVPKPGRD------PQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYE 163
            ..|. :.|.:      |.:....:|..|.|.||:...|...||.|.:..|..|:|...||...|:
plant   125 PSCA-RAGVEGTVSICPPDCFQYKGTFDVFTKIIRQEGLGRLWRGTNAGLALAVPMVGIYLPFYD 188

  Fly   164 YIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGIC 228
            ..:|.|..:           .:::.|                          ::.:.||..:|..
plant   189 MFRNRL
EEL-----------SREKAP--------------------------AMTFCVPTVAGSL 216

  Fly   229 SRTIVVTAITPIEMVRIKMQ----------------------SEYMTYAELWRVLRSLIRQHGIL 271
            :|::..|...||::.|.:||                      ||..|...|...|      |...
plant   217 ARSLACTVCYPIDLARTRMQAFKEAKAGVKPPGVFKTLVGVFSEVRTANNLESSL------HNYR 275

  Fly   272 GLWRGWPPTVMRDAPFSGTYWAVYEAIKR-----AFSVTEPTFLF--SFLTGAISGAVATFVTMP 329
            |||||....:.||.|||...|:..|.||:     |.:.|....:|  :|..|.|:|::|...|.|
plant   276 GLWRGLGAQLARDVPFSAICWSTLEPIKKRLLG
VAGNDTNLVGVFGATFSAGFIAGSIAAAATCP 340

  Fly   330 FDLITTHTQIELGQDVLYEEIGAGTGAGTGTGAGARPKTP-QSAVANSRPSVLSRMRQIYRLQGV 393
            .|:..|..|||                          |.| ::.:..:|.:::    :::|..|:
plant   341 LDVARTRRQIE--------------------------KDPGRALMMTTRQTLI----EVWRDGGM 375

  Fly   394 RGLYVGVMPRMLRVVPACAIMISTFEYSK 422
            |||::|:.||:.|..|:..|::|.:|..|
plant   376 RGLFMGMGPRVARAGPSVGIVVSFYEVVK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 37/136 (27%)
Mito_carr 216..302 CDD:278578 30/112 (27%)
Mito_carr 306..429 CDD:278578 30/120 (25%)
MTM1NP_567790.1 Mito_carr 57..194 CDD:395101 36/134 (27%)
Mito_carr 212..308 CDD:395101 28/101 (28%)
Mito_carr 320..410 CDD:395101 30/115 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 64 1.000 Domainoid score I3661
eggNOG 1 0.900 - - E1_KOG0761
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1691
OMA 1 1.010 - - QHG53824
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm1053
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45760
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1010.020

Return to query results.
Submit another query.