DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tyler and SCaMC

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster


Alignment Length:394 Identity:83/394 - (21%)
Similarity:146/394 - (37%) Gaps:113/394 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KPMQ------QVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCR 102
            |.||      .:|:..:.|.::.....||:.:|..:|.|   .||..:|:..::..|        
  Fly   278 KEMQTGLWWRHLVAGGIAGAVSRTCTAPLDRIKVYLQVQ---TQRMGISECMHIMLN-------- 331

  Fly   103 SSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKN 167
                                           ..|...:|.|....::...|.|...|..||.   
  Fly   332 -------------------------------EGGSRSMWRGNGINVLKIAPETAFKFAAYEQ--- 362

  Fly   168 SLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTI 232
                            ||..:.|.||...:....|                :|...|:|..|:||
  Fly   363 ----------------MKRLIRGDDGSRQMSIVER----------------FYAGAAAGGISQTI 395

  Fly   233 VVTAITPIEMVRIKMQSEYM-TYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYE 296
                |.|:|:::.::..... .||.:......:.:|.|:...:||:.|.::...|::|...||||
  Fly   396 ----IYPMEVLKTRLALRRTGQYAGIADAAVKIYKQEGVRSFYRGYVPNILGILPYAGIDLAVYE 456

  Fly   297 AIKRAFSVT-----EPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGA 356
            .:||.:...     :|:||.....|:.|..:....:.|..|:.|..|.:..:.:           
  Fly   457 TLKRRYIANHDNNEQPSFLVLLACGSTSSTLGQLCSYPLALVRTRLQAQAAETI----------- 510

  Fly   357 GTGTGAGARPKTP---QSAVANSRPSVLSRM-RQIYRLQGVRGLYVGVMPRMLRVVPACAIMIST 417
                 |..:.||.   :|:.|:|....::.: |:|.|.:|:.|||.|:.|..|:|:||.:|....
  Fly   511 -----ANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITPNFLKVLPAVSISYVV 570

  Fly   418 FEYS 421
            :||:
  Fly   571 YEYT 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 22/132 (17%)
Mito_carr 216..302 CDD:278578 24/86 (28%)
Mito_carr 306..429 CDD:278578 31/120 (26%)
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 21/145 (14%)
Mito_carr 375..463 CDD:278578 25/107 (23%)
Mito_carr 470..581 CDD:278578 31/121 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441514
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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