DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tyler and slc25a39

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_956780.1 Gene:slc25a39 / 393458 ZFINID:ZDB-GENE-040426-1250 Length:359 Species:Danio rerio


Alignment Length:415 Identity:146/415 - (35%)
Similarity:212/415 - (51%) Gaps:102/415 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IKPMQQVVSALVGGLITTFVVTPLEVVKTRVQTQH-------AIRQRP-----TVSK-LCYVYHN 94
            |.|:||::::..|.::|:..||||:|||.|:|.|.       |...||     ..|| .|::|.|
Zfish    13 ITPVQQMLASGTGAVLTSLFVTPLDVVKIRLQAQQTPLFQAIAAESRPWFRVTRPSKWKCFLYCN 77

  Fly    95 GLMTH--VCRSSDICVPKPGRDPQNL----RPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALP 153
            |||.|  ||::...|        .||    ....|.:||||||....|...||:||.||||.|:|
Zfish    78 GLMDHVYVCQNMSSC--------SNLYKTSTHFSGTLDAFVKITHNEGLRSLWSGLPPTLVMAVP 134

  Fly   154 STIIYFLTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLP 218
            :|:|||..|:.:::.|.:                                            |:.
Zfish   135 ATVIYFTCYDQLRDFLCY--------------------------------------------SMG 155

  Fly   219 Y---YVPMASGICSRTIVVTAITPIEMVRIKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPT 280
            |   ::|:.:|..:|...|:.|:|:|:||.||||..:.|:||...:||.:.|.|.|.|||||.||
Zfish   156 YHGDHIPLIAGGLARLGAVSVISPLELVRTKMQSRRLQYSELMVCIRSSVAQDGWLSLWRGWGPT 220

  Fly   281 VMRDAPFSGTYWAVYEAIK----RAFSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIEL 341
            |:||.|||..||..||.:|    ..:...:.:|..||..||:|||:|..:|:|||::.|..||:|
Zfish   221 VLRDVPFSALYWFNYELVKAQLCEHYRTPQASFTISFTAGAVSGAIAAVLTLPFDVVKTRRQIQL 285

  Fly   342 GQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRP-SVLSRMRQIYRLQGVRGLYVGVMPRML 405
            |:   .|.:|                    ||:..:| |..:.||.|:...|.:||:.|.:||::
Zfish   286 GE---MEALG--------------------AVSMKKPSSTWNMMRNIWIDMGYKGLFAGFLPRVI 327

  Fly   406 RVVPACAIMISTFEYSKSFFFHYNL 430
            :|.||||:||||:|:.|:||...||
Zfish   328 KVAPACAVMISTYEFGKTFFQERNL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 57/146 (39%)
Mito_carr 216..302 CDD:278578 41/92 (45%)
Mito_carr 306..429 CDD:278578 46/123 (37%)
slc25a39NP_956780.1 Mito_carr 13..150 CDD:278578 56/144 (39%)
Solcar 1 13..149 56/143 (39%)
Solcar 2 157..241 39/83 (47%)
Mito_carr 163..246 CDD:278578 38/82 (46%)
Mito_carr 250..351 CDD:278578 46/123 (37%)
Solcar 3 251..346 44/117 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7403
eggNOG 1 0.900 - - E1_KOG0761
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53824
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm6545
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.880

Return to query results.
Submit another query.