DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tyler and sea

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster


Alignment Length:413 Identity:81/413 - (19%)
Similarity:147/413 - (35%) Gaps:136/413 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YRIKP----------------MQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLC 89
            ||.:|                ::.:|:..:.|.|...:..|.|.|||::|    :.::....|  
  Fly    13 YRRRPWMTEHGAAAADSGQVGLKGIVAGGITGGIEICITYPTEYVKTQLQ----LDEKGAAKK-- 71

  Fly    90 YVYHNGLMTHVCRSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPS 154
               :||:                            .|...|.|...||.||:.|||..:..::|.
  Fly    72 ---YNGI----------------------------FDCVKKTVGERGFLGLYRGLSVLVYGSIPK 105

  Fly   155 TIIYFLTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPY 219
            :...|..:|::|::     .|..:.:.|.....:.|                             
  Fly   106 SAARFGAFEFLKSN-----AVDSRGQLSNSGKLLCG----------------------------- 136

  Fly   220 YVPMASGICSRTIVVTAITPIEMVRIKMQSEYMTYAELWR----VLRSLIRQHGILGLWRGWPPT 280
               :.:|:|.   .:.|:||:|.:::|..::..:....:|    .:..:|:..||.|:::|..||
  Fly   137 ---LGAGVCE---AIVAVTPMETIKVKFINDQRSGNPKFRGFAHGVGQIIKSEGISGIYKGLTPT 195

  Fly   281 VMRDAPFSGTYWAVYEAIKRAFSVTEPT----FLFSFLTGAISGAVATFVTMPFDLITTHTQIEL 341
            :::........:.|.|::|..:...:.|    .|...:.|||:||.:.|...|.|::.|..|   
  Fly   196 ILKQGSNQAIRFFVLESLKDLYKGDDHTKPVPKLVVGVFGAIAGAASVFGNTPLDVVKTRMQ--- 257

  Fly   342 GQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLR 406
                             |..|.....|...||            :|.:.:|....|.|.:||:.|
  Fly   258 -----------------GLEASKYKNTAHCAV------------EILKNEGPAAFYKGTVPRLGR 293

  Fly   407 VVPACAIMISTFEYSKSFFFHYN 429
            |   |..:..||....||...:|
  Fly   294 V---CLDVAITFMIYDSFMDLFN 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 29/145 (20%)
Mito_carr 216..302 CDD:278578 18/89 (20%)
Mito_carr 306..429 CDD:278578 30/126 (24%)
seaNP_001027175.1 PTZ00168 34..302 CDD:185494 73/379 (19%)
Mito_carr 34..117 CDD:278578 25/119 (21%)
Mito_carr 125..220 CDD:278578 20/129 (16%)
Mito_carr 235..314 CDD:278578 29/114 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441490
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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