DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tyler and Slc25a39

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001019963.1 Gene:Slc25a39 / 360636 RGDID:1306193 Length:359 Species:Rattus norvegicus


Alignment Length:417 Identity:136/417 - (32%)
Similarity:200/417 - (47%) Gaps:103/417 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IKPMQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTV-SKL------------------ 88
            |.|:||:|::..|.::|:..:|||:|||.|:|:     ||||| |:|                  
  Rat     9 ISPLQQMVASGAGAVVTSLFMTPLDVVKVRLQS-----QRPTVASELTTPSRFWSLSYTKSPSTL 68

  Fly    89 -----CYVYHNGLM--THVCRSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSP 146
                 |.:|.||::  .::|.:...|... .:||..   ..|.:|||||||...|...||:||..
  Rat    69 QSPGKCLLYCNGVLEPLYLCPNGTRCATW-FQDPTR---FTGTLDAFVKIVRHEGTRTLWSGLPA 129

  Fly   147 TLVSALPSTIIYFLTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAP 211
            |||..:|:|.|||..|:.:|     .:|..|..                                
  Rat   130 TLVMTVPATAIYFTAYDQLK-----AFLCGQSL-------------------------------- 157

  Fly   212 VSTASLPYYVPMASGICSRTIVVTAITPIEMVRIKMQSEYMTYAELWRVLRSLIRQHGILGLWRG 276
              |:.|  |.||.:|..:|...||.::|:|:||.|:|:::::|.||...:::.:.|.|...||.|
  Rat   158 --TSDL--YAPMVAGALARMGTVTVVSPLELVRTKLQAQHVSYRELAACVQAAVAQGGWRSLWLG 218

  Fly   277 WPPTVMRDAPFSGTYWAVYEAIKRAFS---VTEPTFL-FSFLTGAISGAVATFVTMPFDLITTHT 337
            |.||.:||.|||..||..||.:|...:   ..|.|.: .||:.|.|||.||..:|:|||::.|..
  Rat   219 WGPTALRDVPFSALYWFNYELVKSQLNGPRQKEQTSVGISFVAGGISGMVAATLTLPFDVVKTQR 283

  Fly   338 QIELGQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMP 402
            |:.|                 |.....|.|.|:.      .|....:|:|....|.|||:.|.:|
  Rat   284 QMSL-----------------GAVEAMRVKPPRV------DSTWLLLRRIQAESGTRGLFAGFLP 325

  Fly   403 RMLRVVPACAIMISTFEYSKSFFFHYN 429
            |:::..|:|||||||:|:.||||...|
  Rat   326 RIIKAAPSCAIMISTYEFGKSFFHRLN 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 53/153 (35%)
Mito_carr 216..302 CDD:278578 35/85 (41%)
Mito_carr 306..429 CDD:278578 44/123 (36%)
Slc25a39NP_001019963.1 Mito_carr 9..152 CDD:395101 53/156 (34%)
Solcar 1 9..151 53/155 (34%)
CLIP_SPH_mas 71..94 CDD:408197 5/22 (23%)
Solcar 2 159..243 35/85 (41%)
Mito_carr 161..246 CDD:395101 35/86 (41%)
Solcar 3 253..347 40/116 (34%)
Mito_carr 254..350 CDD:395101 42/118 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7742
eggNOG 1 0.900 - - E1_KOG0761
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 288 1.000 Inparanoid score I2735
OMA 1 1.010 - - QHG53824
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm9100
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.930

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