DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tyler and CG5254

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_569856.2 Gene:CG5254 / 31020 FlyBaseID:FBgn0040383 Length:306 Species:Drosophila melanogaster


Alignment Length:390 Identity:95/390 - (24%)
Similarity:155/390 - (39%) Gaps:113/390 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVPKPG 112
            ||::....|.:...::.||:|||||:|.|  ....|..:.|..|::||:                
  Fly    17 QVLAGGSAGFLEVCIMQPLDVVKTRIQIQ--ATPAPNAAALGEVHYNGV---------------- 63

  Fly   113 RDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQ 177
                        .|.|.|:....|.|..|.|:.|.:::..|...|.||.:|..|           
  Fly    64 ------------FDCFAKMYRHEGISSYWKGIMPPILAETPKRAIKFLVFEQTK----------- 105

  Fly   178 KFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMASGICSRTIVVTAITPIEM 242
                              ||.|..     |.|....|.||       :|:.:.|:...|:.|.|:
  Fly   106 ------------------PLFQFG-----SPTPTPLTFSL-------AGLTAGTLEAIAVNPFEV 140

  Fly   243 VRIKMQSE-----YMTYAELWRVLRSLIRQHGI--LGLWRGWPPTVMRDAPFSGTYWAVYEAIKR 300
            |::..|::     ..|:|    |.:.:|:|.|:  .||.:|...|:.|:..|:..|:..|.::|.
  Fly   141 VKVAQQADRQKKMLSTFA----VAKGIIQQDGLGFSGLNKGITATMGRNGVFNMVYFGFYHSVKN 201

  Fly   301 A---FSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGAGTGTGA 362
            .   :..:...||.....|.::|.:|.||.:|||:..:..|                        
  Fly   202 VVPEYKESHLEFLRKVTIGFLAGTLACFVNIPFDVAKSRIQ------------------------ 242

  Fly   363 GARPKTPQSAVANSRPSVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYSKSFFFH 427
            |.:|...|.....:    ||.|..:||.:|.|.||.|::|:::|:.|..||::..||||..:..|
  Fly   243 GPQPVPGQIKYRGT----LSSMGIVYREEGFRALYKGLVPKIMRLGPGGAILLLVFEYSYDYLLH 303

  Fly   428  427
              Fly   304  303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 31/122 (25%)
Mito_carr 216..302 CDD:278578 24/95 (25%)
Mito_carr 306..429 CDD:278578 34/122 (28%)
CG5254NP_569856.2 Mito_carr 18..112 CDD:278578 33/157 (21%)
PTZ00169 19..301 CDD:240302 92/384 (24%)
Mito_carr 122..207 CDD:278578 23/95 (24%)
Mito_carr 209..305 CDD:278578 34/123 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441510
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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