DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tyler and Slc25a40

DIOPT Version :9

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001380639.1 Gene:Slc25a40 / 296813 RGDID:1308774 Length:337 Species:Rattus norvegicus


Alignment Length:408 Identity:135/408 - (33%)
Similarity:207/408 - (50%) Gaps:97/408 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PRYRIKPMQQVVSALVGGLITTFVVTPLEVVKTRVQTQHAIRQRPTVSKLCYVYHNGLMTHVC-- 101
            |..::.|:||::::..|.::|:.:||||:|||.|:|.|:    .|.....|::|.||||.|:|  
  Rat    10 PTIQVTPLQQMMASCAGAVVTSLMVTPLDVVKIRLQAQN----NPFPKGKCFLYSNGLMDHICIC 70

  Fly   102 --RSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFSGLWAGLSPTLVSALPSTIIYFLTYE- 163
              .|......|||.       ..|.:|||:|||...|...||:||.||||.|:|:|:|||..|| 
  Rat    71 EEESKKAWYKKPGN-------FHGTLDAFLKIVRNEGIKSLWSGLPPTLVMAVPATVIYFTCYEQ 128

  Fly   164 ---YIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRGINVSATAPVSTASLPYYVPMAS 225
               ::|..|.                           :..||                  :|:.:
  Rat   129 LSTFLKTKLG---------------------------ENETR------------------IPIVA 148

  Fly   226 GICSRTIVVTAITPIEMVRIKMQSEYMTYAELWRVLRSLIRQHGILGLWRGWPPTVMRDAPFSGT 290
            ||.:|...||.|:|:|::|.||||:..:|.||::::...:.:.|.:.||:||.||::||.|||..
  Rat   149 GIVARFGAVTMISPLELIRTKMQSKTFSYKELYQIVSMKVSEDGWISLWKGWAPTILRDVPFSAM 213

  Fly   291 YWAVYEAIKR----AFSVTEPTFLFSFLTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIG 351
            ||..||.::|    ...:.|.||:.:|..||:||:.|...|:|||::.|..|.:|.   .:|.. 
  Rat   214 YWYNYENLRRWLCEKSDLYESTFMINFTAGALSGSFAAVATLPFDVVKTQKQTQLW---THEYC- 274

  Fly   352 AGTGAGTGTGAGARPKTPQSAVANSRP---SVLSRMRQIYRLQGVRGLYVGVMPRMLRVVPACAI 413
                           |.|:       |   |..|.|:.|...:|..||:.|::||::::||||||
  Rat   275 ---------------KFPE-------PLDMSTWSIMKNIVADRGFSGLFTGLIPRLVKIVPACAI 317

  Fly   414 MISTFEYSKSFFFHYNLD 431
            |||::|..|.||...|::
  Rat   318 MISSYELGKGFFQQQNVE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:278578 54/137 (39%)
Mito_carr 216..302 CDD:278578 34/89 (38%)
Mito_carr 306..429 CDD:278578 43/125 (34%)
Slc25a40NP_001380639.1 Mito_carr 13..137 CDD:395101 53/134 (40%)
Solcar 1 14..132 52/128 (41%)
Solcar 2 140..224 35/101 (35%)
Mito_carr 146..229 CDD:395101 33/82 (40%)
Mito_carr 232..330 CDD:395101 42/123 (34%)
Solcar 3 234..328 40/119 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7742
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 288 1.000 Inparanoid score I2735
OMA 1 1.010 - - QHG53824
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001594
OrthoInspector 1 1.000 - - mtm9100
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45760
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1001
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.070

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