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Protein Alignment His2A:CG33853 and macroh2a1
DIOPT Version :10
| Sequence 1: | NP_001027366.1 |
Gene: | His2A:CG33853 / 3772346 |
FlyBaseID: | FBgn0053853 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_012813820.1 |
Gene: | macroh2a1 / 100038149 |
XenbaseID: | XB-GENE-855803 |
Length: | 372 |
Species: | Xenopus tropicalis |
| Alignment Length: | 123 |
Identity: | 78/123 - (63%) |
| Similarity: | 94/123 - (76%) |
Gaps: | 2/123 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSGRGKGGKVKGKAKSRSDRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLEL 65
||.| |||.|....:||.:||:.|||||:.|.::||:...|:|.|||||:|||:|||.||:|||
Frog 1 MSSR--GGKKKTTKTTRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63
Fly 66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTEKK 123
||||||||||:|:.|||:.||:.||||||:||.|||||.|||||||...||.||...|
Frog 64 AGNAARDNKKSRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSK 121
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| His2A:CG33853 | NP_001027366.1 |
PTZ00017 |
16..124 |
CDD:185399 |
71/108 (66%) |
| macroh2a1 | XP_012813820.1 |
H2A |
15..119 |
CDD:197711 |
70/103 (68%) |
| Macro_H2A-like |
178..368 |
CDD:394875 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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