DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2A:CG33814 and RAT5

DIOPT Version :9

Sequence 1:NP_001027301.1 Gene:His2A:CG33814 / 3772345 FlyBaseID:FBgn0053814 Length:124 Species:Drosophila melanogaster
Sequence 2:NP_200275.1 Gene:RAT5 / 835553 AraportID:AT5G54640 Length:130 Species:Arabidopsis thaliana


Alignment Length:122 Identity:94/122 - (77%)
Similarity:105/122 - (86%) Gaps:4/122 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGRGK---GGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEV 62
            |:||||   .|..| ||.|||::||||||||||.|.|:.|.||||||||||||||||:|||||||
plant     1 MAGRGKTLGSGGAK-KATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEV 64

  Fly    63 LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKK 119
            ||||||||||||||||:|||:|||:||||||:|||..||||.|||:|||..:|||||
plant    65 LELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2A:CG33814NP_001027301.1 PTZ00017 16..124 CDD:185399 85/104 (82%)
RAT5NP_200275.1 PLN00157 1..130 CDD:177758 94/122 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 132 1.000 Domainoid score I1660
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I1426
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000046
OrthoInspector 1 1.000 - - mtm981
orthoMCL 1 0.900 - - OOG6_100077
Panther 1 1.100 - - O PTHR23430
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X55
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.870

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