Protein Alignment Polr3K and RPB9

DIOPT Version :10

• Sequence 1: NP_001027443.1
• Gene: Polr3K / 3772344
• FlyBaseID: FBgn0061362
• Length: 108
• Species: Drosophila melanogaster
• Sequence 2: NP_011445.1
• Gene: RPB9 / 852810
• SGDID: S000003038
• Length: 122
• Species: Saccharomyces cerevisiae
• Alignment Length: 107
• Identity: 32/107 - (29%)
• Similarity: 46/107 - (42%)
• Gaps: 14/107 - (13%)

  Fly     4 FCPSCGNILIIEEDTNCHR--FTCNTCPYISK------IRRKISTKTFPRLKEVDHVLGGKAAWE 60
            ||..|.|:|...||...:|  |.|.||.|:.:      .|.::.|    .:.|...|:....:..
Yeast     6 FCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELIT----NIGETAGVVQDIGSDP 66

  Fly    61 NVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKC--CNH 100
            .:..:|.|||.|..:...|.|.|.|..|..|..|:.|  |:|
Yeast    67 TLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSH 108

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3K	NP_001027443.1	RPB9	4..107	CDD:441202	32/107 (30%)
		Zn-ribbon_RPC11	61..108	CDD:259794	15/42 (36%)
RPB9	NP_011445.1	RPOL9	5..58	CDD:197822	16/55 (29%)
		Zn-ribbon_RPB9	64..111	CDD:259793	15/45 (33%)