Protein Alignment Polr3K and AT3G25940

DIOPT Version :10

• Sequence 1: NP_001027443.1
• Gene: Polr3K / 3772344
• FlyBaseID: FBgn0061362
• Length: 108
• Species: Drosophila melanogaster
• Sequence 2: NP_566786.1
• Gene: AT3G25940 / 822191
• AraportID: AT3G25940
• Length: 119
• Species: Arabidopsis thaliana
• Alignment Length: 130
• Identity: 34/130 - (26%)
• Similarity: 49/130 - (37%)
• Gaps: 47/130 - (36%)

  Fly     4 FCPSCGNILIIE-----EDTNCHRFTCNTCPYISK----------IRRKISTKTF---------- 43
            ||..||.:|:::     |..:| :.|.|....|.|          |||::....|
plant    11 FCNLCGTMLVLKSTKYAECPHC-KTTRNAKDIIDKEIAYTVSAEDIRRELGISLFGEKTQAEAEL 74

  Fly    44 PRLKEVDHVLGGKAAWENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
            |::|:.                   |..|.|....:...|||||||..||:|.|.|  |.|.:.:
plant    75 PKIKKA-------------------CEKCQHPELVYTTRQTRSADEGQTTYYTCPN--CAHRFTE 118

  Fly   109  108
            plant   119  118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3K	NP_001027443.1	RPB9	4..107	CDD:441202	34/127 (27%)
		Zn-ribbon_RPC11	61..108	CDD:259794	17/46 (37%)
AT3G25940	NP_566786.1	RPB9	11..115	CDD:441202	33/125 (26%)
		Zn-ribbon_RPA12	75..118	CDD:259792	19/63 (30%)