DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33785 and polr3k

DIOPT Version :9

Sequence 1:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster
Sequence 2:NP_001002553.1 Gene:polr3k / 436826 ZFINID:ZDB-GENE-040718-291 Length:108 Species:Danio rerio


Alignment Length:108 Identity:76/108 - (70%)
Similarity:86/108 - (79%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLFFCPSCGNILIIEEDTNCHRFTCNTCPYISKIRRKISTKTFPRLKEVDHVLGGKAAWENVDST 65
            ||.|||:|||:||:||...|.||.||||||:..|.||::.:.:|:|||||.||||.|||||||||
Zfish     1 MLLFCPTCGNVLIVEEGQRCFRFACNTCPYVHNITRKVNNRKYPKLKEVDDVLGGSAAWENVDST 65

  Fly    66 DAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWRD 108
            ...||.|.|.||||||||||||||||||||||||.:|.|.|||
Zfish    66 AEPCPKCEHPRAYFMQIQTRSADEPMTTFYKCCNIQCGHRWRD 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 74/106 (70%)
polr3kNP_001002553.1 RPB9 1..108 CDD:224510 74/106 (70%)
RPOL9 4..53 CDD:197822 28/48 (58%)
Zn-ribbon_RPC11 61..108 CDD:259794 36/46 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575689
Domainoid 1 1.000 79 1.000 Domainoid score I8653
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5610
Inparanoid 1 1.050 181 1.000 Inparanoid score I3980
OMA 1 1.010 - - QHG54273
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004777
OrthoInspector 1 1.000 - - oto39103
orthoMCL 1 0.900 - - OOG6_101491
Panther 1 1.100 - - LDO PTHR11239
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1188
SonicParanoid 1 1.000 - - X3361
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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