Protein Alignment Polr3K and CG8117

DIOPT Version :10

• Sequence 1: NP_001027443.1
• Gene: Polr3K / 3772344
• FlyBaseID: FBgn0061362
• Length: 108
• Species: Drosophila melanogaster
• Sequence 2: NP_573049.2
• Gene: CG8117 / 32499
• FlyBaseID: FBgn0030663
• Length: 162
• Species: Drosophila melanogaster
• Alignment Length: 121
• Identity: 26/121 - (21%)
• Similarity: 41/121 - (33%)
• Gaps: 43/121 - (35%)

  Fly    26 NTC--PYISKIRRKISTKTFPRLKEV--DHVLG-------GKAAWENVDSTDA------------ 67
            |.|  .|.::||.:::....|:..|:  ..:||       .|...|.:.|.|.
  Fly    45 NGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKMTPEEMASDDMKQMRQKYVQDSI 109

  Fly    68 ----------------ECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECNHTWR 107
                            :|..|..:..  .|:..|..|||:.||..|  .||.:.|:
  Fly   110 NAAQMAKVQGTKTDQFKCERCDKRNC--SQLHIRDGDEPIITFVIC--DECGNRWK 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr3K	NP_001027443.1	RPB9	4..107	CDD:441202	25/119 (21%)
		Zn-ribbon_RPC11	61..108	CDD:259794	15/75 (20%)
CG8117	NP_573049.2	TFSII	<4..161	CDD:273592	25/119 (21%)