DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33785 and Med26

DIOPT Version :9

Sequence 1:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster
Sequence 2:XP_038950406.1 Gene:Med26 / 306328 RGDID:1309524 Length:609 Species:Rattus norvegicus


Alignment Length:27 Identity:7/27 - (25%)
Similarity:11/27 - (40%) Gaps:0/27 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KISTKTFPRLKEVDHVLGGKAAWENVD 63
            |:|.:..||..:.:........|..||
  Rat    17 KLSFRALPRTPQAESEQHSGDEWVGVD 43

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 7/27 (26%)
Med26XP_038950406.1 TFS2N 47..107 CDD:197766
Med26_M 199..426 CDD:406186
Med26_C 428..607 CDD:406185
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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