DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33785 and Tcea3

DIOPT Version :9

Sequence 1:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster
Sequence 2:NP_001015008.1 Gene:Tcea3 / 298559 RGDID:1311369 Length:348 Species:Rattus norvegicus


Alignment Length:138 Identity:35/138 - (25%)
Similarity:53/138 - (38%) Gaps:39/138 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SCGNILIIEEDTNCHRFTCNTCPYISKIRRKISTKTFPR-------------------------- 45
            :|..:....||............|.:::|.:||....||                          
  Rat   211 NCDKLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAEEM 275

  Fly    46 ----LKEVDHVLGGKAAWENV------DSTD-AECPTCGHKRAYFMQIQTRSADEPMTTFYKCCN 99
                |:|:.:.:..:|..|:.      .:|| ..|..|..|...:.|:||||||||||||..|  
  Rat   276 ASDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEPMTTFVLC-- 338

  Fly   100 HECNHTWR 107
            :||.:.|:
  Rat   339 NECGNRWK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 35/138 (25%)
Tcea3NP_001015008.1 TFIIS_I 4..80 CDD:238107
TFSII 5..348 CDD:273592 35/138 (25%)
TFIIS_M 185..292 CDD:284835 11/80 (14%)
Zn-ribbon_TFIIS 301..347 CDD:259796 22/48 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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