DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33785 and Tcea2

DIOPT Version :9

Sequence 1:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster
Sequence 2:XP_006235802.1 Gene:Tcea2 / 29575 RGDID:61825 Length:318 Species:Rattus norvegicus


Alignment Length:69 Identity:25/69 - (36%)
Similarity:36/69 - (52%) Gaps:9/69 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LKEVDHVLGGKAAWENV------DSTDA-ECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNHECN 103
            |||:...:..:|..|:.      ..||. .|..|..|...:.|:||||:||||||:..|  :||.
  Rat   250 LKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVC--NECG 312

  Fly   104 HTWR 107
            :.|:
  Rat   313 NRWK 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 25/69 (36%)
Tcea2XP_006235802.1 TFSII 35..318 CDD:273592 25/69 (36%)
TFIIS_I <35..94 CDD:238107
TFIIS_M 155..262 CDD:284835 3/11 (27%)
Zn-ribbon_TFIIS 271..317 CDD:259796 20/48 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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