DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33785 and Tcea1

DIOPT Version :9

Sequence 1:NP_001027443.1 Gene:CG33785 / 3772344 FlyBaseID:FBgn0061362 Length:108 Species:Drosophila melanogaster
Sequence 2:NP_001153223.1 Gene:Tcea1 / 21399 MGIID:1196624 Length:312 Species:Mus musculus


Alignment Length:69 Identity:28/69 - (40%)
Similarity:37/69 - (53%) Gaps:9/69 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LKEVDHVLGGKAAWEN----VDSTDAECPTCG---HKRAYFMQIQTRSADEPMTTFYKCCNHECN 103
            |||:...|..:|..|:    ...|..:..|||   .|...:.|:||||||||||||..|  :||.
Mouse   244 LKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVC--NECG 306

  Fly   104 HTWR 107
            :.|:
Mouse   307 NRWK 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33785NP_001027443.1 RPB9 1..108 CDD:224510 28/69 (41%)
Tcea1NP_001153223.1 TFSII 33..312 CDD:273592 28/69 (41%)
TFIIS_I <35..89 CDD:238107
TFIIS_M 149..256 CDD:284835 4/11 (36%)
Zn-ribbon_TFIIS 265..311 CDD:259796 22/48 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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