DRSC/TRiP Functional Genomics Resources

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Protein Alignment His2B:CG33910 and Hist1h2bc

DIOPT Version :9

Sequence 1:NP_001027283.1 Gene:His2B:CG33910 / 3772299 FlyBaseID:FBgn0053910 Length:123 Species:Drosophila melanogaster
Sequence 2:XP_038952337.1 Gene:Hist1h2bc / 680403 RGDID:1591796 Length:134 Species:Rattus norvegicus


Alignment Length:128 Identity:103/128 - (80%)
Similarity:107/128 - (83%) Gaps:9/128 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MP-PKTSGKAAKKAG-----KAQKNITKTDKKKKRKRKESYAIYIYKVLKQVHPDTGISSKAMSI 59
            || |..|..|.||..     ||||   |..||:||.|||||::|:||||||||||||||||||.|
  Rat     1 MPEPAKSAPAPKKGSKKAVTKAQK---KDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGI 62

  Fly    60 MNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 122
            |||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    63 MNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33910NP_001027283.1 H2B 33..121 CDD:197718 82/87 (94%)
Hist1h2bcXP_038952337.1 H2B 28..123 CDD:197718 87/94 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4523
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 191 1.000 Inparanoid score I3779
OMA 1 1.010 - - QHG53922
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000065
OrthoInspector 1 1.000 - - otm44705
orthoMCL 1 0.900 - - OOG6_100082
Panther 1 1.100 - - O PTHR23428
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X77
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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