DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment His2B:CG33910 and h2bc12

DIOPT Version :10

Sequence 1:NP_001027283.1 Gene:His2B:CG33910 / 3772299 FlyBaseID:FBgn0053910 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_001006891.1 Gene:h2bc12 / 448733 XenbaseID:XB-GENE-5719555 Length:126 Species:Xenopus tropicalis


Alignment Length:128 Identity:106/128 - (82%)
Similarity:111/128 - (86%) Gaps:7/128 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MP-PKTSGKAAKKAGKAQKNITKTDK---KKKRK-RKESYAIYIYKVLKQVHPDTGISSKAMSIM 60
            || |..|..|.||..|  |.:|||.|   ||:|| ||||||||:|||||||||||||||||||||
 Frog     1 MPDPAKSAPAPKKGSK--KAVTKTQKKDGKKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIM 63

  Fly    61 NSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK 123
            ||||||:|||||.||||||||||||||||||||||||||||||||||||||||||||||||:|
 Frog    64 NSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
His2B:CG33910NP_001027283.1 HFD_H2B 33..120 CDD:467035 83/86 (97%)
h2bc12NP_001006891.1 HFD_H2B 30..123 CDD:467035 87/92 (95%)

Return to query results.
Submit another query.