Protein Alignment LSm-4 and Commd9

DIOPT Version :9

• Sequence 1: NP_001027237.1
• Gene: LSm-4 / 3772280
• FlyBaseID: FBgn0067622
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001028864.1
• Gene: Commd9 / 295956
• RGDID: 1307706
• Length: 198
• Species: Rattus norvegicus
• Alignment Length: 205
• Identity: 40/205 - (19%)
• Similarity: 77/205 - (37%)
• Gaps: 57/205 - (27%)

  Fly    35 SVHYIE----SKKSSSEVL---------SLALNKLTNGGHEIPPNFCELFTMVFLTMQIFLRYPK 86
            |.|::.    .|.||.:|:         |.||:..|     :..|.|...::.....:..|:
  Rat     6 SEHFVALQSLLKASSKDVVRQLCQESFSSSALHSKT-----LLDNTCSSLSVTQEEAEQLLQ--- 62

  Fly    87 GVVKHHELRKCLMDDLNLTEE----YVED--------ICKVLLNHRDVLSKNFSDTKMDRVKMSK 139
              ..||..|.....||:..|.    :.|:        :.|::|.|...........::...::..
  Rat    63 --ALHHFTRLVAFRDLSSAEAILALFPENFHQNLKNLLTKIILEHISTWRTEAQANQISLPRLVD 125

  Fly   140 LQWRINISLSLNTV-QIDKPTIVLHFKLQ-------------------NKEYRTLELPLSMFQQV 184
            |.||::|..|.::: ::..||.:|..|:|                   :||  ||:..|....::
  Rat   126 LDWRVDIKTSSDSISRMAVPTCLLQMKIQEDPSLCGEKPSISAVTVELSKE--TLDTMLDGLGRI 188

  Fly   185 RYNIALLLNE 194
            |..::.:.|:
  Rat   189 RDQLSAVANK 198

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm-4	NP_001027237.1	HCaRG	22..196	CDD:284632	40/205 (20%)
Commd9	NP_001028864.1	Exo70	10..>146	CDD:281124	26/145 (18%)
		Commd9	90..197	CDD:240105	19/108 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	1	0.960